ggKbase home page

RTP_09252017_14_scaffold_964

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_964_1
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..600)
DNA (600bp) protein (200aa)
Multicopper oxidase type 3 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQK7_THISH
multicopper oxidase type 3
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44612.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
RTP_09252017_14_scaffold_964_2
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(617..1639)
DNA (1023bp) protein (341aa)
Multicopper oxidase type 3 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GQK6_THISH
multicopper oxidase type 3
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO44613.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
RTP_09252017_14_scaffold_964_3
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2030..4411)
DNA (2382bp) protein (794aa)
Cyclic di-GMP phosphodiesterase Gmr {ECO:0000313|EMBL:KFB73651.1}; EC=3.1.4.52 {ECO:0000313|EMBL:KFB73651.1};; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
Sensory box/GGDEF family protein n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CU79_9ALTE
sensory box/GGDEF family protein
RTP_09252017_14_scaffold_964_4
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4408..5151)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8H5_GEOLS
Conserved exported protein of unknown function
Tax=RBG_16_Gammaproteobacteria_62_13__curated
RTP_09252017_14_scaffold_964_5
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5428..5700)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IX14_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23369.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
RTP_09252017_14_scaffold_964_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5829..6563
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036292B5
periplasmic or secreted lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_964_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6613..7014)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003711F25
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_964_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7236..8540
DNA (1305bp) protein (435aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
sulfite reductase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003804AFE
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_964_9
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8556..8771)
DNA (216bp) protein (72aa)
hypothetical protein
Tax=RBG_16_Gallionellales_56_9_curated
RTP_09252017_14_scaffold_964_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8863..10479)
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036F5F0F
ppdK; pyruvate, phosphate dikinase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_964_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10472..12394)
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLT5_THIDA
Uncharacterized protein {ECO:0000313|EMBL:AAZ96320.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein
RTP_09252017_14_scaffold_964_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12531..13034
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLT6_THIDA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_964_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13459..15270
DNA (1812bp) protein (604aa)
Putative uncharacterized protein id=1327870 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_964_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15329..15670
DNA (342bp) protein (114aa)
Putative uncharacterized protein id=1327869 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_964_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15675..16082
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367604D
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_964_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16174..17565)
DNA (1392bp) protein (464aa)
Putative phosphatase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEV5_THIDA
phosphatase
Putative phosphatase {ECO:0000313|EMBL:AAZ97376.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_964_17
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17803..18060
DNA (258bp) protein (86aa)
Protein NnrU n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WVV0_9ALTE
Protein NnrU {ECO:0000313|EMBL:ENO15686.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
protein NnrU
Displaying 17 items

View Taxonomy