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RTP_09252017_14_scaffold_1234

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_1234_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)
cyanate hydratase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] id=12496318 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
cyanate lyase (EC:4.2.1.104)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1234_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180..1121)
DNA (942bp) protein (314aa)
Nitrate ABC transporter, ATPase subunits C and D id=1340122 bin=GWE1_T_denit_62_9 species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrate ABC transporter ATPases C and D
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1234_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1126..1977)
DNA (852bp) protein (284aa)
nitrate ABC transporter inner membrane subunit; K15577 nitrate/nitrite transport system permease protein id=12496316 bin=THIO_MID species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
nitrate ABC transporter inner membrane subunit
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1234_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1974..3332)
DNA (1359bp) protein (453aa)
Putative nitrate transporter component, NrtA id=1340120 bin=GWE1_T_denit_62_9 species=Halothiobacillus neapolitanus genus=Halothiobacillus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrate transporter component, NrtA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1234_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3718..4275
DNA (558bp) protein (186aa)
Esterase id=1340114 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
esterase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1234_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4282..6150
DNA (1869bp) protein (623aa)
ribonuclease II n=1 Tax=Thiobacillus thioparus RepID=UPI00037534DA
ribonuclease II
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_1234_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6234..7073
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003725540
TonB-like protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1234_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7178..8191
DNA (1014bp) protein (338aa)
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] id=12494047 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
cbbF; fructose-1,6-bisphosphatase (EC:3.1.3.11)
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1234_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8255..10366)
DNA (2112bp) protein (704aa)
diguanylate cyclase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003641C38
diguanylate cyclase/phosphodiesterase
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) {ECO:0000313|EMBL:AAZ98531.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_1234_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10561..13281)
DNA (2721bp) protein (907aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F9A27
hydrophobe/amphiphile efflux-1 family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 10 items

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