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RTP_09252017_14_scaffold_1398

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_1398_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..687)
DNA (687bp) protein (229aa)
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:6.3.2.5 4.1.1.36); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] id=12494057 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase (EC:4.1.1.36 6.3.2.5)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1398_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

749..1423
DNA (675bp) protein (225aa)
UPF0758 protein Tbd_2588 id=1329465 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
DNA repair protein RadC
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1398_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1534..1770
DNA (237bp) protein (79aa)
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=12496288 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_1398_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1782..1949
DNA (168bp) protein (56aa)
50S ribosomal protein L33
50S ribosomal protein L33P; K02913 large subunit ribosomal protein L33 id=12496287 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_1398_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2036..3208)
DNA (1173bp) protein (391aa)
Fatty acid desaturase id=1329462 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
fatty acid desaturase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1398_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3269..4570)
DNA (1302bp) protein (434aa)
Conserved hypothetical transmembrane protein id=1329461 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1398_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4573..5787)
DNA (1215bp) protein (405aa)
Long chain fatty acid transport protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFQ7_THIDA
long chain fatty acid transport protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_1398_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5813..7630)
DNA (1818bp) protein (606aa)
AMP-dependent synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F055D
Long-chain fatty-acid-CoA ligase {ECO:0000313|EMBL:AAZ98550.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
long-chain fatty-acid-CoA ligase
RTP_09252017_14_scaffold_1398_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7691..8938)
DNA (1248bp) protein (416aa)
Putative tRNA and rRNA cytosine-C5-methylase id=1329458 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tRNA and rRNA cytosine-C5-methylase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1398_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8988..9290)
DNA (303bp) protein (101aa)
Putative uncharacterized protein id=1329457 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1398_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9287..9715)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=1329456 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1398_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9768..10823)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BECD1
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AAZ98554.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_1398_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10892..11635)
DNA (744bp) protein (248aa)
Putative uncharacterized protein id=1329454 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 13 items

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