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RTP_09252017_14_scaffold_1525

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_1525_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233..958)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKD5_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96850.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_1525_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..2513)
DNA (1356bp) protein (452aa)
DNA repair protein radA id=1332585 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
DNA repair protein RadA
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2521..3408)
DNA (888bp) protein (296aa)
cysM; cysteine synthase B (EC:2.5.1.47)
cysteine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000372BEE4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_1525_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3410..4732)
DNA (1323bp) protein (441aa)
UDP-glucose dehydrogenase (EC:1.1.1.22)
UDP-glucose dehydrogenase id=1332583 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4745..5440)
DNA (696bp) protein (232aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
orotidine 5''''-phosphate decarboxylase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003696F87
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5478..6644)
DNA (1167bp) protein (389aa)
Putative N-acetylglucosaminyl transferase id=1332581 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
tetratricopeptide repeat-containing protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6887..7177)
DNA (291bp) protein (97aa)
Putative uncharacterized protein id=1332580 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7285..7569)
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B3B2F
integration host factor subunit beta
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1525_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7573..9258)
DNA (1686bp) protein (562aa)
30S ribosomal protein S1 id=1332578 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rpsA; 30S ribosomal protein S1
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9371..10048)
DNA (678bp) protein (226aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase id=1332577 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10045..11127)
DNA (1083bp) protein (361aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F6B7B
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1525_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11127..11990)
DNA (864bp) protein (288aa)
prephenate dehydrogenase (EC:1.3.1.12)
3-phosphoshikimate 1-carboxyvinyltransferase/prephenate dehydrogenase id=1332574 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1525_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11987..12985)
DNA (999bp) protein (333aa)
histidinol-phosphate aminotransferase (EC:2.6.1.-); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=12497450 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
histidinol-phosphate aminotransferase (EC:2.6.1.-)
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 13 items

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