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RTP_09252017_14_scaffold_1608

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_1608_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1716
DNA (1716bp) protein (572aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase A id=1360714 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1608_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1785..2996)
DNA (1212bp) protein (404aa)
Outer membrane protein id=1360713 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1608_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3150..3572)
DNA (423bp) protein (141aa)
Large-conductance mechanosensitive channel id=1360712 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
large conductance mechanosensitive channel protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1608_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3691..4755
DNA (1065bp) protein (355aa)
dihydrouridine synthase; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] id=12495605 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
dihydrouridine synthase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1608_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4770..5009
DNA (240bp) protein (80aa)
Fis family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00036C3836
Fis family transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1608_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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5018..6577
DNA (1560bp) protein (520aa)
IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10)
IMP cyclohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI000360A556
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_09252017_14_scaffold_1608_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6679..7956
DNA (1278bp) protein (426aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037822EB
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RTP_09252017_14_scaffold_1608_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7967..8515
DNA (549bp) protein (183aa)
tRNA threonylcarbamoyladenosine biosynthesis protein RimN id=1354142 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
translation factor SUA5
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1608_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8515..9426
DNA (912bp) protein (304aa)
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic id=1354143 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_1608_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9429..10301
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B28A9
transmembrane protein
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 10 items

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