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RTP_09252017_14_scaffold_2438

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_09252017_14_scaffold_2438_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1235)
DNA (1233bp) protein (411aa)
Alpha amylase, catalytic subdomain n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJM9_THIDA
alpha amylase
Alpha amylase, catalytic subdomain {ECO:0000313|EMBL:AAZ97125.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_2438_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1389..1856
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK71_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96919.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
RTP_09252017_14_scaffold_2438_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1903..2130)
DNA (228bp) protein (76aa)
Putative cation transport regulator n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GW10_9GAMM
cation transport regulator
Putative cation transport regulator {ECO:0000313|EMBL:AGA90176.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
RTP_09252017_14_scaffold_2438_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2188..2850)
DNA (663bp) protein (221aa)
Putative flavodoxin reductase id=1342604 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
flavodoxin reductase
Tax=GWE1_Thiobacillus_62_9_curated
RTP_09252017_14_scaffold_2438_5
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2924..3838)
DNA (915bp) protein (305aa)
diguanylate cyclase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035CD38D
Diguanylate cyclase {ECO:0000313|EMBL:KEA61797.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
PAS sensor diguanylate cyclase/phophodiesterase
RTP_09252017_14_scaffold_2438_6
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3990..4949)
DNA (960bp) protein (320aa)
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor id=12496989 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA polymerase sigma factor RpoS
Tax=CG_Hydro_01
RTP_09252017_14_scaffold_2438_7
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5171..5770)
DNA (600bp) protein (200aa)
LuxR family transcriptional regulator n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B73920
response regulator
Response regulator {ECO:0000313|EMBL:AFL72909.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
RTP_09252017_14_scaffold_2438_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5767..7152)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B657C5
PAS sensor protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
Displaying 8 items

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