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RTP_11222018_0_1um_scaffold_2787

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_2787_1
unknown

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1..111
DNA (111bp) protein (37aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_2787_2

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108..767
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTW4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10686.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
mannose-sensitive agglutinin (MSHA)
RTP_11222018_0_1um_scaffold_2787_3

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764..1453
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTW3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10685.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ
RTP_11222018_0_1um_scaffold_2787_4

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1438..1800
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QTW2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10684.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
mannose-sensitive agglutinin (MSHA) biogenesis protein MshK
RTP_11222018_0_1um_scaffold_2787_5

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1931..3355
DNA (1425bp) protein (475aa)
Putative Type II secretory pathway, component HofQ n=1 Tax=mine drainage metagenome RepID=E6QTW1_9ZZZZ
Putative Type II secretory pathway, component HofQ {ECO:0000313|EMBL:CBI10683.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pilus (MSHA type) biogenesis protein MshL
RTP_11222018_0_1um_scaffold_2787_6

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3359..4261
DNA (903bp) protein (301aa)
Putative Type II secretory pathway, component ExeA n=1 Tax=mine drainage metagenome RepID=E6QTW0_9ZZZZ
Putative Type II secretory pathway, component ExeA {ECO:0000313|EMBL:CBI10682.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_2787_7
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4258..5280
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037A0B7F
Putative PEP-CTERM system TPR-repeat lipoprotein {ECO:0000313|EMBL:KFC65150.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
MSHA biogenesis protein MshN
RTP_11222018_0_1um_scaffold_2787_8
unknown

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comp(5358..5501)
DNA (144bp) protein (48aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_2787_9
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5613..7508
DNA (1896bp) protein (632aa)
ATP-binding cassette, sub-family F, member 3 n=1 Tax=Azoarcus sp. KH32C RepID=H0Q0A9_9RHOO
yheS; ATP-binding cassette, sub-family F, member 3
ATP-binding cassette, sub-family F, member 3 {ECO:0000313|EMBL:BAL26707.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
RTP_11222018_0_1um_scaffold_2787_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7495..8250
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003725163
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
RTP_11222018_0_1um_scaffold_2787_11

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comp(9464..11332)
DNA (1869bp) protein (623aa)
Pyruvate kinase {ECO:0000313|EMBL:CBI10516.1}; EC=2.7.1.40 {ECO:0000313|EMBL:CBI10516.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=mine drainage metagenome RepID=E6QTE4_9ZZZZ
RTP_11222018_0_1um_scaffold_2787_12

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11539..12288
DNA (750bp) protein (250aa)
Putative Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:CBI09323.1}; EC=3.1.2.6 {ECO:0000313|EMBL:CBI09323.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative Hydroxyacylglutathione hydrolase n=1 Tax=mine drainage metagenome RepID=E6QQ02_9ZZZZ
beta-lactamase domain-containing protein
RTP_11222018_0_1um_scaffold_2787_13

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comp(12364..12576)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002FF5839
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBI10071.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying 13 items

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