name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
RTP_11222018_0_1um_scaffold_340_1 |
Not on your lists |
3..206
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QU34_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI10756.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator
|
|
RTP_11222018_0_1um_scaffold_340_2 |
Not on your lists |
295..705
|
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7SE58_9HELI
hypothetical protein
DNA-binding protein {ECO:0000313|EMBL:EQD27079.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
|
|
RTP_11222018_0_1um_scaffold_340_3 |
Not on your lists |
702..1172
|
Putative Death-on-curing family protein n=1 Tax=mine drainage metagenome RepID=E6QU35_9ZZZZ
Putative Death-on-curing family protein {ECO:0000313|EMBL:CBI10757.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
virulence-related protein
|
|
RTP_11222018_0_1um_scaffold_340_4
Thalassotalea sp. ND16A, Thalassotalea, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1166..2215
|
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1535422 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassotalea.;" source="Thalassotalea sp. ND16A.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Glaciecola chathamensis S18K6 RepID=K6XD40_9ALTE
CRISPR-associated Cas1 family protein
|
|
RTP_11222018_0_1um_scaffold_340_5
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2212..5148
|
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HRL4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KID56004.1}; TaxID=43657 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea.;"
CRISPR-associated endonuclease Cas3-HD
|
|
RTP_11222018_0_1um_scaffold_340_6
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5152..6099
|
Uncharacterized protein n=1 Tax=Vibrio cholerae HE48 RepID=F9B110_VIBCL
Putative uncharacterized protein {ECO:0000313|EMBL:EFH73386.1}; TaxID=345074 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae RC385.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_340_7
Vibrio metschnikovii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6109..7119
|
hypothetical protein n=1 Tax=Oligella ureolytica RepID=UPI00036577F1
Putative uncharacterized protein {ECO:0000313|EMBL:EEX37077.1}; TaxID=675813 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio metschnikovii CIP 69.14.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_340_8
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7129..7680
|
CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST n=1 Tax=Pseudoalteromonas luteoviolacea 2ta16 RepID=V4HNL8_9GAMM
CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST {ECO:0000313|EMBL:ESP92395.1}; TaxID=1353533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea 2ta16.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_340_9
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7795..7947
|
Uncharacterized protein n=1 Tax=Methylophaga lonarensis MPL RepID=M7NZ77_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EMR12521.1}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
DNA-binding protein
|
|
RTP_11222018_0_1um_scaffold_340_10
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7994..8392
|
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IB44_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK45279.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_340_11
Yersinia frederiksenii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10853..11842)
|
Uncharacterized protein n=1 Tax=Vibrio cholerae HE48 RepID=F9B116_VIBCL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJI86204.1}; TaxID=1454377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia frederiksenii Y225.;"
|
|
RTP_11222018_0_1um_scaffold_340_12
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12930..13217
|
Prevent host death protein, Phd antitoxin id=2069357 bin=GWE2_Gallionellales_58_10 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
prevent-host-death protein
Tax=GWE2_Gallionellales_58_10_curated
|
|
RTP_11222018_0_1um_scaffold_340_13
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13214..13513
|
Plasmid stabilization system id=2069354 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
plasmid stabilization protein
Tax=GWE2_Gallionellales_58_10_curated
|
|
RTP_11222018_0_1um_scaffold_340_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13671..14030
|
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMC8_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
RTP_11222018_0_1um_scaffold_340_15
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14031..14777
|
RES domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAJ0_9PROT
RES domain-containing protein
RES domain-containing protein {ECO:0000313|EMBL:BAN35945.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
|
|
RTP_11222018_0_1um_scaffold_340_16
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14857..15624)
|
IclR family transcriptional regulator n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00036FB3E4
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EAU54434.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
IclR family transcriptional regulator
|
|
RTP_11222018_0_1um_scaffold_340_17
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15715..17910
|
transketolase n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00036379D4
Transketolase, central region {ECO:0000313|EMBL:EAU54435.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
transketolase
|
|
RTP_11222018_0_1um_scaffold_340_18
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17916..19247
|
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYX1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EAU54436.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
Hrp-dependent type III effector protein
|
|
RTP_11222018_0_1um_scaffold_340_19
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19247..20740
|
FAD-binding protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037C49F9
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:EAU54437.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
FAD linked oxidase domain protein
|
|
RTP_11222018_0_1um_scaffold_340_20
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20740..21813
|
Glycolate oxidase, GlcE subunit n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYW9_9PROT
Glycolate oxidase, GlcE subunit {ECO:0000313|EMBL:EAU54438.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
FAD linked oxidase
|
|
RTP_11222018_0_1um_scaffold_340_21
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21815..23023
|
glycolate oxidase n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037A9E24
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus ferrooxydans PV-1.;"
hypothetical protein
|
|
RTP_11222018_0_1um_scaffold_340_trna_2
unknown
|
Not on your lists |
comp(23098..23170)
|
transferRNA Arg
|
|
RTP_11222018_0_1um_scaffold_340_22
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23231..23773
|
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin {ECO:0000313|EMBL:BAN34832.1}; EC=1.11.1.15 {ECO:0000313|EMBL:BAN34832.1};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Peroxiredoxin n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B2E2_9PROT
|
|
RTP_11222018_0_1um_scaffold_340_23
unknown
|
Not on your lists |
comp(23788..23916)
|
This feature has no annotations |
|
RTP_11222018_0_1um_scaffold_340_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24005..24688
|
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6)
Leucyl/phenylalanyl-tRNA--protein transferase (L/F-transferase) (Leucyltransferase) (Phenyalanyltransferase) n=1 Tax=mine drainage metagenome RepID=E6QTF2_9ZZZZ
|
|
RTP_11222018_0_1um_scaffold_340_25 |
Not on your lists |
24688..25419
|
Putative arginyl-tRNA--protein transferase (R-transferase) (Arginyltransferase) Ate-like {ECO:0000313|EMBL:CBI10525.1}; EC=2.3.2.8 {ECO:0000313|EMBL:CBI10525.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Putative arginyl-tRNA--protein transferase (R-transferase) (Arginyltransferase) Ate-like n=1 Tax=mine drainage metagenome RepID=E6QTF3_9ZZZZ
arginyl-tRNA-protein transferase
|
|
RTP_11222018_0_1um_scaffold_340_26
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25382..25786
|
globin n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037EFA62
globin
Globin {ECO:0000313|EMBL:ACL74049.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
|
|
RTP_11222018_0_1um_scaffold_340_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25798..26592
|
thymidylate synthase (EC:2.1.1.45)
thymidylate synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI000367B6D7
Tax=GWE1_Thiobacillus_62_9_curated
|
|
RTP_11222018_0_1um_scaffold_340_28 |
Not on your lists |
26589..28214
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QXG6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11940.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
response regulator receiver domain-containing protein
|
|
RTP_11222018_0_1um_scaffold_340_29 |
Not on your lists |
28184..28867
|
Putative Signal transduction histidine kinase sensor protein n=1 Tax=mine drainage metagenome RepID=E6QXG5_9ZZZZ
Putative Signal transduction histidine kinase sensor protein {ECO:0000313|EMBL:CBI11939.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
signal transduction histidine kinase
|