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RTP_11222018_0_1um_scaffold_19464

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_19464_1
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12..254
DNA (243bp) protein (81aa)
Prevent-host-death family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNA4_POLNA
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABM37132.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
RTP_11222018_0_1um_scaffold_19464_2
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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251..673
DNA (423bp) protein (141aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Ribonuclease VapC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNA5_POLNA
PilT domain-containing protein
RTP_11222018_0_1um_scaffold_19464_3

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860..1201
DNA (342bp) protein (114aa)
Transposase of ISCARN115 , IS4 family IS4 group n=1 Tax=mine drainage metagenome RepID=E6QXH7_9ZZZZ
Transposase of ISCARN115 , IS4 family IS4 group {ECO:0000313|EMBL:CBI11951.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IS4 family transposase
RTP_11222018_0_1um_scaffold_19464_4
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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1249..1800
DNA (552bp) protein (184aa)
Putative uncharacterized protein id=2043729 bin=GWD2_Deltaproteobacteria_55_8 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
RTP_11222018_0_1um_scaffold_19464_5

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1935..2552
DNA (618bp) protein (206aa)
Transposase of ISCARN115 , IS4 family IS4 group n=1 Tax=mine drainage metagenome RepID=E6QXH7_9ZZZZ
Transposase of ISCARN115 , IS4 family IS4 group {ECO:0000313|EMBL:CBI11951.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Integrase catalytic subunit
RTP_11222018_0_1um_scaffold_19464_6
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2556..2690)
DNA (135bp) protein (45aa)
Integrase, catalytic region n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122F4_POLSJ
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABE46588.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying 6 items

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