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RTP_11222018_0_1um_scaffold_3179

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_3179_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..506)
DNA (504bp) protein (168aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
superoxide dismutase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00035E1763
superoxide dismutase, copper/zinc binding
RTP_11222018_0_1um_scaffold_3179_2
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(582..926)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KBW9_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL96325.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
RTP_11222018_0_1um_scaffold_3179_3

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comp(1129..3369)
DNA (2241bp) protein (747aa)
Putative lysine decarboxylase {ECO:0000313|EMBL:CBI09980.1}; EC=4.1.1.18 {ECO:0000313|EMBL:CBI09980.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ldcC; lysine decarboxylase (EC:4.1.1.18)
Putative lysine decarboxylase n=1 Tax=mine drainage metagenome RepID=E6QRV8_9ZZZZ
RTP_11222018_0_1um_scaffold_3179_4
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3469..3945)
DNA (477bp) protein (159aa)
deoxycytidine triphosphate deaminase n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000373B445
deoxycytidine triphosphate deaminase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
RTP_11222018_0_1um_scaffold_3179_5

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comp(3982..5070)
DNA (1089bp) protein (363aa)
Protein Mrp homolog n=1 Tax=mine drainage metagenome RepID=E6QRW2_9ZZZZ
Protein Mrp homolog {ECO:0000313|EMBL:CBI09984.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
chromosome partitioning ATPase
RTP_11222018_0_1um_scaffold_3179_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5237..5851)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037BB224
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL74320.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_11222018_0_1um_scaffold_3179_7
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5848..6381)
DNA (534bp) protein (178aa)
dinucleoside polyphosphate hydrolase; K08311 putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] id=12496700 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
dinucleoside polyphosphate hydrolase
Tax=BJP_S1_SUB10_Methylophilales_55_32
RTP_11222018_0_1um_scaffold_3179_8
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6464..6895
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI000362423F
leucine-rich repeat-containing protein
Leucine-rich repeat-containing protein {ECO:0000313|EMBL:ADC70741.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
RTP_11222018_0_1um_scaffold_3179_9

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6987..8309
DNA (1323bp) protein (441aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC 3.5.4.n1) (MTA/SAH deaminase) {ECO:0000313|EMBL:CBI09533.1}; EC=3.5.4.28 {ECO:0000313|EMBL:CBI09533.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
S-adenosylhomocysteine deaminase (EC:3.5.4.28)
5-methylthioadenosine/S-adenosylhomocysteine deaminase (EC 3.5.4.n1) (MTA/SAH deaminase) n=1 Tax=mine drainage metagenome RepID=E6QQL2_9ZZZZ
RTP_11222018_0_1um_scaffold_3179_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8318..8929
DNA (612bp) protein (204aa)
hypothetical protein id=12493435 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative membrane-associated protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
RTP_11222018_0_1um_scaffold_3179_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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9028..9243
DNA (216bp) protein (72aa)
acetyl-CoA synthetase (EC:6.2.1.1)
acetyl-CoA synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00036E417E
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 11 items

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