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RTP_11222018_0_1um_scaffold_3479

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_3479_1

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comp(2..1525)
DNA (1524bp) protein (508aa)
GTP-binding protein LepA {ECO:0000313|EMBL:CBI11144.1}; EC=2.7.7.4 {ECO:0000313|EMBL:CBI11144.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GTP-binding protein LepA n=1 Tax=mine drainage metagenome RepID=E6QV71_9ZZZZ
GTP-binding protein LepA
RTP_11222018_0_1um_scaffold_3479_2

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comp(1559..1804)
DNA (246bp) protein (82aa)
Putative glutaredoxin 2 n=1 Tax=mine drainage metagenome RepID=E6QV72_9ZZZZ
Putative glutaredoxin 2 {ECO:0000313|EMBL:CBI11145.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
glutaredoxin-like domain containing protein
RTP_11222018_0_1um_scaffold_3479_3

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comp(1946..2434)
DNA (489bp) protein (163aa)
Putative Positive regulator of sigma E,RseC/MucC n=1 Tax=mine drainage metagenome RepID=E6QV73_9ZZZZ
Putative Positive regulator of sigma E,RseC/MucC {ECO:0000313|EMBL:CBI11146.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sigma E positive regulator RseC/MucC
RTP_11222018_0_1um_scaffold_3479_4

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comp(2431..3381)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QV74_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11147.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sigma E regulatory protein, MucB/RseB
RTP_11222018_0_1um_scaffold_3479_5

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comp(3378..3914)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QV75_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11148.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
anti sigma-E protein, RseA
RTP_11222018_0_1um_scaffold_3479_6

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comp(3924..4523)
DNA (600bp) protein (200aa)
RNA polymerase sigma-E factor (Sigma-24) n=1 Tax=mine drainage metagenome RepID=E6QV76_9ZZZZ
RNA polymerase sigma-E factor (Sigma-24) {ECO:0000313|EMBL:CBI11149.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RNA polymerase sigma factor RpoE
RTP_11222018_0_1um_scaffold_3479_7

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comp(4684..5052)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QV77_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI11150.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
RTP_11222018_0_1um_scaffold_3479_8
Mannheimia varigena, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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5201..5617
DNA (417bp) protein (139aa)
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=1432056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia varigena USDA-ARS-USMARC-1261.;"
Ribosomal RNA large subunit methyltransferase M n=1 Tax=Haemophilus parahaemolyticus HK385 RepID=I3DN56_HAEPH
Ribosomal RNA large subunit methyltransferase M
Displaying 8 items

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