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RTP_11222018_0_1um_scaffold_3909

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RTP_11222018_0_1um_scaffold_3909_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..326
DNA (324bp) protein (108aa)
Radical SAM domain protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GUG4_THISH
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACL73284.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
RTP_11222018_0_1um_scaffold_3909_2
unknown

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633..752
DNA (120bp) protein (40aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_3909_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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724..1494
DNA (771bp) protein (257aa)
putative long-chain fatty acid transport protein id=12493176 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
long-chain fatty acid transport protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_3909_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1755..2114)
DNA (360bp) protein (120aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM43_9BURK
S-adenosylmethionine decarboxylase-related protein
RTP_11222018_0_1um_scaffold_3909_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2158..3246
DNA (1089bp) protein (363aa)
CobW protein id=1328071 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cobW protein
Tax=GWE1_Thiobacillus_62_9_curated
RTP_11222018_0_1um_scaffold_3909_6
unknown

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3333..3701
DNA (369bp) protein (123aa)

This feature has no annotations

RTP_11222018_0_1um_scaffold_3909_7
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3851..5215
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFX5_AZOSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV24996.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
RTP_11222018_0_1um_scaffold_3909_8
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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5226..6134
DNA (909bp) protein (303aa)
Periplasmic solute-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9I4_9PROT
periplasmic solute-binding protein
Periplasmic solute-binding protein {ECO:0000313|EMBL:BAN34165.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
RTP_11222018_0_1um_scaffold_3909_9
R_Alphaproteobacteria_63_12, Alphaproteobacteria, Proteobacteria, Bacteria

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6134..6289
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003639083
ABC-3 transporter family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
RTP_11222018_0_1um_scaffold_3909_10
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6304..6774
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036A4F3E
ABC-3 transporter family protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
RTP_11222018_0_1um_scaffold_3909_11
unknown

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6883..6990
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 11 items

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