ggKbase home page

14_0919_02_20cm_scaffold_60

Search features with annotation key words

Displaying items 1-30 of 133 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_02_20cm_scaffold_60_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3..1889
DNA (1887bp) protein (629aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G9W4_CHLAD
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_60_2
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

1889..2629
DNA (741bp) protein (247aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase subunit B n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVX2_ROSS1
Tax=RBG_16_Acidobacteria_68_9_curated
14_0919_02_20cm_scaffold_60_3
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(2583..3548)
DNA (966bp) protein (322aa)
Malate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A902_GEMAT
Malate dehydrogenase
Tax=RBG_16_Acidobacteria_68_9_curated
14_0919_02_20cm_scaffold_60_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3715..4752)
DNA (1038bp) protein (346aa)
Molybdenum cofactor biosynthesis protein A id=2653035 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moaA; molybdenum cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0919_02_20cm_scaffold_60_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4745..5209)
DNA (465bp) protein (155aa)
Molybdopterin biosynthesis MoaE protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJF4_9CHLR
molybdopterin biosynthesis MoaE protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_6
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(5228..5491)
DNA (264bp) protein (88aa)
Molybdopterin synthase sulfur carrier subunit n=1 Tax=Oryza glaberrima RepID=I1P1B8_ORYGL
thiamine S protein
Tax=RBG_16_Acidobacteria_68_9_curated
14_0919_02_20cm_scaffold_60_7
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(5515..6129)
DNA (615bp) protein (205aa)
Similar to tr|Q3MGW5|Q3MGW5_ANAVT Peptidase M61 n=1 Tax=Microcystis aeruginosa PCC 9701 RepID=I4INI6_MICAE
peptidase M61 domain-containing protein
Tax=RBG_16_Acidobacteria_68_9_curated
14_0919_02_20cm_scaffold_60_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6104..7258)
DNA (1155bp) protein (385aa)
Peptidase M61 domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNU4_ROSCS
peptidase M61 domain-containing protein
Peptidase M61 domain protein {ECO:0000313|EMBL:ABU59238.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
14_0919_02_20cm_scaffold_60_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7363..7677)
DNA (315bp) protein (105aa)
DNA-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A906_GEMAT
histone family protein DNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7736..8815)
DNA (1080bp) protein (360aa)
carA; carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A907_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8832..9215)
DNA (384bp) protein (128aa)
Preprotein translocase, SecG subunit n=2 Tax=Anaeromyxobacter RepID=B4UEJ0_ANASK
preprotein translocase subunit SecG
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9231..9986)
DNA (756bp) protein (252aa)
Triosephosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A909_GEMAT
Triosephosphate isomerase, bacterial/eukaryotic
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_60_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9983..11161)
DNA (1179bp) protein (393aa)
Phosphoglycerate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A910_GEMAT
Phosphoglycerate kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_60_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11158..12165)
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A911_GEMAT
glyceraldehyde-3-phosphate dehydrogenase, type I
14_0919_02_20cm_scaffold_60_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12175..12936)
DNA (762bp) protein (254aa)
Competence protein F, putative n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8G7_GEOLS
competence protein F
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12929..13750)
DNA (822bp) protein (274aa)
Shikimate dehydrogenase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIU5_9CHRO
Shikimate dehydrogenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_60_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13734..14228)
DNA (495bp) protein (165aa)
Protein-tyrosine-phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A914_GEMAT
Phosphotyrosine protein phosphatase I superfamily
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14225..14878)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A915_GEMAT
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14875..15462)
DNA (588bp) protein (196aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A916_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15551..16909)
DNA (1359bp) protein (453aa)
DNA repair protein radA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A917_GEMAT
radA; DNA repair protein RadA
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16902..18323)
DNA (1422bp) protein (474aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A918_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0919_02_20cm_scaffold_60_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18289..19071)
DNA (783bp) protein (261aa)
Putative DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A919_GEMAT
putative DNA glycosylase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19068..20261)
DNA (1194bp) protein (398aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBJ9_9FIRM
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AHG90856.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_60_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20261..20473)
DNA (213bp) protein (71aa)
Putative RNA polymerase omega subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A920_GEMAT
rpoZ; putative RNA polymerase omega subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20473..21162)
DNA (690bp) protein (230aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A921_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21159..22028)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A922_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22080..23876)
DNA (1797bp) protein (599aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_60_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23873..25366)
DNA (1494bp) protein (498aa)
leucyl aminopeptidase (EC:3.4.11.1) rbh
Probable cytosol aminopeptidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWY8_RUBXD rbh
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0919_02_20cm_scaffold_60_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25368..26570)
DNA (1203bp) protein (401aa)
isocitrate dehydrogenase, NADP-dependent
Isocitrate dehydrogenase [NADP] id=3661145 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_60_30
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27021..28073
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PC06_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX08343.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Displaying items 1-30 of 133 in total

View Taxonomy