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14_0919_02_20cm_scaffold_174

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Displaying items 1-30 of 59 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0919_02_20cm_scaffold_174_1
unknown

Not on your lists

3..98
DNA (96bp) protein (32aa)

This feature has no annotations

14_0919_02_20cm_scaffold_174_2
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121..1395)
DNA (1275bp) protein (425aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZK9_9BACT
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:AKF04245.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
sigma-70 region 2 domain protein
14_0919_02_20cm_scaffold_174_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1392..1748)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037C58D1
Uncharacterized protein {ECO:0000313|EMBL:AKF04246.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
YCII-related protein
14_0919_02_20cm_scaffold_174_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

1905..2174
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000377E898
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92268.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_174_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2220..3251
DNA (1032bp) protein (344aa)
Oxidoreductase family protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FMN9_9BACT
dehydrogenase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_174_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3272..4168
DNA (897bp) protein (299aa)
Glyoxalase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8F5_ACIC5
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:ACO32759.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
14_0919_02_20cm_scaffold_174_7
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4314..5219
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SQ1_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD71202.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
14_0919_02_20cm_scaffold_174_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5425..7104
DNA (1680bp) protein (560aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV1_KORVE
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92267.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_174_9
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7111..7632
DNA (522bp) protein (174aa)
Formate/nitrite transporter n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZHY0_9EURY
Formate/nitrite transporter {ECO:0000313|EMBL:ELY85651.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
protein-disulfide isomerase
14_0919_02_20cm_scaffold_174_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7648..7971
DNA (324bp) protein (108aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91743.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_174_11
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7981..8373
DNA (393bp) protein (131aa)
DoxX protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YUJ2_AEQSU
DoxX protein
DoxX protein {ECO:0000313|EMBL:AFL80660.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
14_0919_02_20cm_scaffold_174_12

Not on your lists

comp(8377..8823)
DNA (447bp) protein (149aa)
chemotaxis protein CheY n=1 Tax=Methylobacter marinus RepID=UPI00037F3451
Marine sediment metagenome DNA, contig: S01H1_L01648 {ECO:0000313|EMBL:GAF83266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver domain-containing protein
14_0919_02_20cm_scaffold_174_13
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8854..10329)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Phytochrome, two-component sensor histidine kinase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWC4_9BACT
integral membrane sensor signal transduction histidine kinase
14_0919_02_20cm_scaffold_174_14

Not on your lists

comp(10331..10873)
DNA (543bp) protein (181aa)
Putative transmembrane protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYC2_OPITP
Uncharacterized protein {ECO:0000313|EMBL:AIA11042.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transmembrane protein
14_0919_02_20cm_scaffold_174_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10861..12810)
DNA (1950bp) protein (650aa)
TonB-dependent receptor plug n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB6_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:EEF60377.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TonB-dependent receptor, plug
14_0919_02_20cm_scaffold_174_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13037..15115)
DNA (2079bp) protein (693aa)
histidine kinase
Multi-sensor hybrid histidine kinase id=4788462 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0919_02_20cm_scaffold_174_17
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15286..15867
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034A8209
Uncharacterized protein {ECO:0000313|EMBL:KJY26631.1}; TaxID=68223 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
TetR family transcriptional regulator
14_0919_02_20cm_scaffold_174_18
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15868..16788
DNA (921bp) protein (307aa)
ALS operon regulatory protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XMA9_9RHIZ
ALS operon regulatory protein {ECO:0000313|EMBL:ERI15698.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
LysR family transcriptional regulator
14_0919_02_20cm_scaffold_174_19
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

16825..17178
DNA (354bp) protein (118aa)
ArsR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NKP0_GLOVI
transcription regulator ArsR
ArsR family transcriptional regulatory protein {ECO:0000313|EMBL:BAC89378.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
14_0919_02_20cm_scaffold_174_20
Leptospira fainei, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17175..17681
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3V4S4_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:EPG76438.1}; TaxID=1193011 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira fainei serovar Hurstbridge str. BUT 6.;"
glutathione s-transferase protein
14_0919_02_20cm_scaffold_174_21
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17692..18165
DNA (474bp) protein (158aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QZ7_RHOFD
3-demethylubiquinone-9 3-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
14_0919_02_20cm_scaffold_174_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18162..19274)
DNA (1113bp) protein (371aa)
Major facilitator superfamily MFS_1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R09_SOLUE
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABJ87911.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0919_02_20cm_scaffold_174_23
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19381..21618)
DNA (2238bp) protein (746aa)
Putative uncharacterized protein id=3880966 bin=GWF2_Melioribacter_38_21 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
14_0919_02_20cm_scaffold_174_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21615..22778)
DNA (1164bp) protein (388aa)
chromate transporter, chromate ion transporter (CHR) family
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:AHG89381.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
chrA; Chromate transport protein ChrA id=14626822 bin=bin7_NC10_sister species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
14_0919_02_20cm_scaffold_174_25
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22775..23818)
DNA (1044bp) protein (348aa)
UPI0003CEE57F related cluster n=1 Tax=unknown RepID=UPI0003CEE57F
Chromate resistance protein {ECO:0000313|EMBL:CDN96159.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
14_0919_02_20cm_scaffold_174_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23920..24828
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL07_KORVE
protein of unknown function LppY and LpqO
Uncharacterized protein {ECO:0000313|EMBL:AHG89657.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0919_02_20cm_scaffold_174_27
unknown

Not on your lists

comp(24867..25457)
DNA (591bp) protein (197aa)

This feature has no annotations

14_0919_02_20cm_scaffold_174_28
unknown

Not on your lists

25682..26008
DNA (327bp) protein (109aa)

This feature has no annotations

14_0919_02_20cm_scaffold_174_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26089..27201)
DNA (1113bp) protein (371aa)
Putative histidine kinase, classic n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D423_DEIDV
histidine kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0919_02_20cm_scaffold_174_30
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(27295..28863)
DNA (1569bp) protein (523aa)
diguanylate cyclase id=14428813 bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
diguanylate cyclase
Tax=CSP1_5_NC10
Displaying items 1-30 of 59 in total

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