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14_0927_12_20cm_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 103 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0927_12_20cm_scaffold_415_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3..560
DNA (558bp) protein (186aa)
50S ribosomal protein L2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL2_KORVE
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000255|HAMAP-Rule:MF_01320}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0927_12_20cm_scaffold_415_2
unknown

Not on your lists

626..940
DNA (315bp) protein (105aa)

This feature has no annotations

14_0927_12_20cm_scaffold_415_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


948..1304
DNA (357bp) protein (119aa)
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=12555575 bin=CNBR_ACIDO species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsS; 30S ribosomal protein S19
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_4
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists


1308..1820
DNA (513bp) protein (171aa)
50S ribosomal protein L22 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V805_TERSS
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
14_0927_12_20cm_scaffold_415_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


1854..2525
DNA (672bp) protein (224aa)
30S ribosomal protein S3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS3_KORVE
30S ribosomal protein S3
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


2560..2976
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL16_KORVE
rplP; 50S ribosomal protein L16
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
14_0927_12_20cm_scaffold_415_7
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2979..3182
DNA (204bp) protein (68aa)
50S ribosomal protein L29 n=1 Tax=Bavariicoccus seileri RepID=UPI0003B7A4F2
rpmC; 50S ribosomal protein L29
Tax=BJP_IG2103_Clostridiales_50_15
14_0927_12_20cm_scaffold_415_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


3183..3476
DNA (294bp) protein (98aa)
30S ribosomal protein S17 n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035C4BA3
30S ribosomal protein S17
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


3498..3866
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003803127
rplN; 50S ribosomal protein L14
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


3870..4223
DNA (354bp) protein (118aa)
rplX; 50S ribosomal protein L24
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=12555568 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists


4243..4797
DNA (555bp) protein (185aa)
50S ribosomal protein L5 n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036F66F6
rplE; 50S ribosomal protein L5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
14_0927_12_20cm_scaffold_415_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

4801..4986
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822EB2
rpsZ; 30S ribosomal protein S14
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_0927_12_20cm_scaffold_415_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


4994..5392
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E56F9
30S ribosomal protein S8
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


5421..5972
DNA (552bp) protein (184aa)
50S ribosomal protein L6 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL6_SOLUE
rplF; 50S ribosomal protein L6
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
14_0927_12_20cm_scaffold_415_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


5985..6365
DNA (381bp) protein (127aa)
50S ribosomal protein L18 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL18_CARHZ
rplR; 50S ribosomal protein L18
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


6370..6948
DNA (579bp) protein (193aa)
30S ribosomal protein S5 n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V7K1_TERSS
30S ribosomal protein S5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
14_0927_12_20cm_scaffold_415_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


6945..7154
DNA (210bp) protein (70aa)
50S ribosomal protein L30 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THC6_9CHLR
50S ribosomal protein L30
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


7159..7683
DNA (525bp) protein (175aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=12555560 bin=CNBR_ACIDO species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplO; 50S ribosomal protein L15
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


7707..9101
DNA (1395bp) protein (465aa)
Protein translocase subunit SecY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WB2_SOLUE
protein translocase subunit SecY/sec61 alpha
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

9117..9803
DNA (687bp) protein (229aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=KAD_THEM4
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_21
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

9908..10681
DNA (774bp) protein (258aa)
map; methionine aminopeptidase (EC:3.4.11.18)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035ECA88
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
14_0927_12_20cm_scaffold_415_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10746..11009
DNA (264bp) protein (88aa)
Translation initiation factor IF-1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=IF1_KORVE
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0927_12_20cm_scaffold_415_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11168..11281
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RL36_SOLUE
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000255|HAMAP-Rule:MF_00251}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
14_0927_12_20cm_scaffold_415_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


11298..11687
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS13_SOLUE
rpsM; 30S ribosomal protein S13
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


11766..12224
DNA (459bp) protein (153aa)
30S ribosomal protein S11 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS11_KORVE
30S ribosomal protein S11
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
14_0927_12_20cm_scaffold_415_26
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


12301..12933
DNA (633bp) protein (211aa)
30S ribosomal protein S4 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS4_SOLUE
30S ribosomal protein S4
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13157..14188
DNA (1032bp) protein (344aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RPOA_KORVE
DNA-directed RNA polymerase subunit alpha
14_0927_12_20cm_scaffold_415_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists


14389..14808
DNA (420bp) protein (140aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=17104027 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
rplQ; 50S ribosomal protein L17
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
14_0927_12_20cm_scaffold_415_29
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14917..15117
DNA (201bp) protein (67aa)
Cysteine synthase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZF3_9RHIZ
Cysteine synthase {ECO:0000313|EMBL:EIM29345.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
cysteine synthase
14_0927_12_20cm_scaffold_415_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15267..15602
DNA (336bp) protein (112aa)
Transcriptional regulator, PadR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X84_SOLUE
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABJ85731.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying items 1-30 of 103 in total

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