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RifSed_csp1_16ft_2_scaffold_52927_2

Organism: RifSed_csp1_16ft_2_Methanoperedens_43_9

partial RP 23 / 55 MC: 5 BSCG 18 / 51 MC: 1 ASCG 20 / 38
Location: 892..1269

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9K4_METMS similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 123.0
  • Bit_score: 156
  • Evalue 1.00e-35
Putative transcriptional regulator with an HTH domain {ECO:0000313|EMBL:KCZ73072.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 125.0
  • Bit_score: 200
  • Evalue 8.60e-49
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 123.0
  • Bit_score: 156
  • Evalue 2.90e-36

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 378
ATGACCGCAGATGATCTGACAAGGGCTGCAGTAGAGTCCGATGAGGCTTTCATTAAAGAATTCGCAAGGATAATAAAAGAAGAGCTGCGCATGACAGCCGCGGAATTCAGTGAAAAGTCGGGCATACCCCCAAGTACGATTTACAAGCTCCTGTCAGGTCACCGTGAGCCAAATATCAAGACATTAAGGCAGATAGTAAAGGCGCTGCGTAAGTTCGAGGGATCTGAAAAAGCAGAGTTCATCGCTGTGATCGCAGCCCGCCCGGTTCTGGATTATATAACAGAGAAGAAACTAAAAGTAAATGGGCGCCTGGTGACCGTCAGGGAATACTCAGCGACCTCAATGGAAGATGCAATCGTCGCAGCCATAAGAGCCTAA
PROTEIN sequence
Length: 126
MTADDLTRAAVESDEAFIKEFARIIKEELRMTAAEFSEKSGIPPSTIYKLLSGHREPNIKTLRQIVKALRKFEGSEKAEFIAVIAARPVLDYITEKKLKVNGRLVTVREYSATSMEDAIVAAIRA*