ggKbase home page

RifSed_csp1_16ft_2_scaffold_54786_2

Organism: RifSed_csp1_16ft_2_Methanoperedens_43_9

partial RP 23 / 55 MC: 5 BSCG 18 / 51 MC: 1 ASCG 20 / 38
Location: comp(376..795)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein Tax=Calothrix sp. PCC 6303 RepID=K9V7H5_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 137.0
  • Bit_score: 172
  • Evalue 1.50e-40
Transposase {ECO:0000313|EMBL:EKF04584.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 138.0
  • Bit_score: 179
  • Evalue 1.70e-42
transposase similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 137.0
  • Bit_score: 172
  • Evalue 4.30e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tolypothrix sp. PCC 7601 → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGATCATAGTTAAAGAAAATCTCAAAACCAAATCCAGAGATTTTGTGGTTTTATTCAGCAGTGATCTGGATTTGGAATACGAGAAGTTGATCGACTATTACAAGCTACGTTTTCAGATTGAGTTCAATTTCCGAGATGCAAAGCAATATTGGGGATTAGAGGATTTTATGAATATCAAGGAAACACCTGTAAAAAATGCAATTAACCTTGCTTTTTTTATGGTAAATCTTTCAAATATTTTAATAAACAAAGTTCGTCCACAGAATGCGGAATTTAGTGTTCAAGATCTAAAAGCATATTTTAGAGGCAGTAAATATGTCAATGAAGTATTAAAATTACTTCCAGAAAAACTTGATCCAATTTTAATTCAGCAAATATTTAAAGAATTGGGGGTATTAGGTGGAATTAATACTGATTAA
PROTEIN sequence
Length: 140
VIIVKENLKTKSRDFVVLFSSDLDLEYEKLIDYYKLRFQIEFNFRDAKQYWGLEDFMNIKETPVKNAINLAFFMVNLSNILINKVRPQNAEFSVQDLKAYFRGSKYVNEVLKLLPEKLDPILIQQIFKELGVLGGINTD*