ggKbase home page

RifSed_csp1_16ft_2_scaffold_64454_4

Organism: RifSed_csp1_16ft_2_Methanoperedens_43_9

partial RP 23 / 55 MC: 5 BSCG 18 / 51 MC: 1 ASCG 20 / 38
Location: comp(2506..2841)

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3) similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 100.0
  • Bit_score: 122
  • Evalue 4.10e-26
Type I restriction-modification system specificity subunit Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466N9_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 100.0
  • Bit_score: 122
  • Evalue 1.40e-25
Uncharacterized protein {ECO:0000313|EMBL:KKG72522.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 104.0
  • Bit_score: 124
  • Evalue 6.90e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina mazei → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 336
GCAACCGCAGGACAATTTAATTTGACAATTACCGTATGTCGTAATCTTCCTTTGCCCCTTCCTCCCCTCGCTGAGCAGCGCCGCATCGTTGCCGAGGTCGAGCGCCGCCTCTCAGTAAGCGACAAAATGGAAGAAACCATATCGGAATCCCTACAAAAAGCAGAATCCCTGCGCCAGAGCATTCTGAAAAAAGCCTTTGAGGGAAAACTGCTTAATAAAAAAGAACTGGAAAAAGTTCGAAACGCTCCGGATTGGGAGCCTGCCGAGAAACTGCTTGAGAGGATTAAGACTGAGAAAGTAAAGAAGCAAAAGAATACACACAGGTCAGGGGAATAA
PROTEIN sequence
Length: 112
ATAGQFNLTITVCRNLPLPLPPLAEQRRIVAEVERRLSVSDKMEETISESLQKAESLRQSILKKAFEGKLLNKKELEKVRNAPDWEPAEKLLERIKTEKVKKQKNTHRSGE*