ggKbase home page

RifSed_csp1_16ft_3_scaffold_147842_4

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: 933..1298

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D1B816 related cluster Tax=unknown RepID=UPI0003D1B816 similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 120.0
  • Bit_score: 168
  • Evalue 3.30e-39
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:KCZ71969.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 120.0
  • Bit_score: 211
  • Evalue 6.20e-52
response regulator receiver similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 119.0
  • Bit_score: 161
  • Evalue 1.50e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 366
ATGAGTAAGAAAATAATGGTCGTTGACGATGAACCGGACACTGTGGACCTGGTTAAACTCGTGCTTGAAACAGAGGGTTTTGAAGTGATGACCGCTTACAGCGGCCGCGAGTGCCTGAGAAAACTGAAAGAAGAAAAGCCGGATGGTGTGCTTCTGGACATAATGATGCCTGAGATGGACGGGTGGGAAGTATTCAAAAAGATCCGTGATATGGACGAAAATTTACCTGTGGCGATGCTCACTGTCAGGAACCAGGATATCGATAAAATGCTGGGGCTGCATGTTCTGAAAGCAAATGATTACATTACAAAACCCTTTGGAAGAAAGGAGTTAGTAGAAAGGGTTAGAAAAATGGTCAAACCTTGA
PROTEIN sequence
Length: 122
MSKKIMVVDDEPDTVDLVKLVLETEGFEVMTAYSGRECLRKLKEEKPDGVLLDIMMPEMDGWEVFKKIRDMDENLPVAMLTVRNQDIDKMLGLHVLKANDYITKPFGRKELVERVRKMVKP*