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RifSed_csp1_16ft_3_scaffold_187112_1

Organism: RifSed_csp1_16ft_3_Methanoperedens_43_8

partial RP 26 / 55 MC: 4 BSCG 15 / 51 ASCG 21 / 38
Location: comp(1..1194)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 386.0
  • Bit_score: 699
  • Evalue 1.40e-198
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 385.0
  • Bit_score: 571
  • Evalue 4.20e-160
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 386.0
  • Bit_score: 565
  • Evalue 6.50e-159

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1194
GTGCCAGGGTTATCCTGGATATATAGGGGTGTTAGCATGGAAATAAGAAAGATATCTGATTACATTTGGGAGATACCTGCTACCGAGAAGGAGGGGATGCTTGTACCAGCCAGAATATACGCCACTGAGAAGCTTCTTGGCGAGATGGATAAAGGGGTATTCGAGCAGGTTACAAATGTGGCATGCCTTCCAGGGATACAAAAATACTCATACTGCATGCCTGACGGTCACTGGGGATATGGCTTCCCAATAGGTGGGGTTGCTGCCTTCTCCAGAGAGGATGGTGTAATATCTCCTGGCGGGATAGGTTTCGATATCAACTGCGGTATGAGGCTTATCAGGACAGACCTGACTGTCAGCGAGGTTAAACCCAGGATAAGGGAACTGGTAGATATTCTATTCAAAACCGTGCCTGCAGGGGTGGGAAGCAAAGGATTGGTGAAGCTGTCGGTAGAAGAATTCAAGAGGGTGATGATTCACGGAGTAGAGTGGTGCATCGAGAAAGGCTACGGCTGGGAGCACGACAAAGAAAGAATAGAGGAACATGGCTGCATGCCAGGCGCTGACCCTTCAAAGGTGAGCGAGAAAGCCATAAGCCGGGGGATTTCCCAGCTTGGCACCCTTGGCTCAGGGAACCACTATCTTGAGATACAGGTTGCTCAGCCTGAGAAAATATTTGATAAAAATGTGGCTAAAGCATTCGGAATCTTCGAGAACCAGATCCTCGTAATGGTTCATTGCGGCTCCCGGGGCTTTGGGCACCAGGTTGCGACAGATTACCTGCGTGTTTTTGATACTGCTATGAAGAAATACGGGATCGTGGTCAGGGACAGGGAGCTCGCCTGTGCCCCGTTTAACTCACCCGAGGGGCAGGACTACTACAAGGCTATGGCCTGCGCAGCGAACGTAGCTTTTGCAAACCGACAGGTGATAGTTCATAGGGTCAGGGAGGGCTTCAGCGAGGTTTTTGGTAAAGAGCCAGAAGAATTGGGAATGGATATAATATACGATGTAGCCCACAATGTTGCCAAGATCGAGACCCATGAGGTGGATGGAGAAGAGAAAGAACTCCTTGTCCATAGAAAGGGTTCAACACGATGCTTCGGACCCGGGAGGAAAGAGATACCCGAAATATACAGGAAAATAGGCCAGCCGGTAATTGTTGGAGGTTCGATGGAGACAGGTTCGTATCTT
PROTEIN sequence
Length: 398
VPGLSWIYRGVSMEIRKISDYIWEIPATEKEGMLVPARIYATEKLLGEMDKGVFEQVTNVACLPGIQKYSYCMPDGHWGYGFPIGGVAAFSREDGVISPGGIGFDINCGMRLIRTDLTVSEVKPRIRELVDILFKTVPAGVGSKGLVKLSVEEFKRVMIHGVEWCIEKGYGWEHDKERIEEHGCMPGADPSKVSEKAISRGISQLGTLGSGNHYLEIQVAQPEKIFDKNVAKAFGIFENQILVMVHCGSRGFGHQVATDYLRVFDTAMKKYGIVVRDRELACAPFNSPEGQDYYKAMACAANVAFANRQVIVHRVREGFSEVFGKEPEELGMDIIYDVAHNVAKIETHEVDGEEKELLVHRKGSTRCFGPGRKEIPEIYRKIGQPVIVGGSMETGSYL