ggKbase home page

RifSed_csp1_19ft_2_scaffold_35358_1

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: 2..253

Top 3 Functional Annotations

Value Algorithm Source
JAMM-like protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM15_METZD similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 80.0
  • Bit_score: 110
  • Evalue 7.20e-22
Proteasome Rpn11 subunit JAMM motif {ECO:0000313|EMBL:KCZ73143.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 83.0
  • Bit_score: 140
  • Evalue 7.00e-31
JAMM similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 80.0
  • Bit_score: 110
  • Evalue 2.00e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 252
GATGAAAGCGCTGTTATGAAGTTGTTCATGCTTCCCAATATATCCACGATCGGAACCGTGCACAGCCACCCTTCAGGAAACCGCAGACCTTCAGGCGCGGACCTTGAACTCTTTGACAGGAAAGGGATGTATCACATCATCGTGGGCGAGCCGTTTGATGCGTCAAGCTGGACATGCTATGATAATAGCGGGAAAATGATCAAGCTCGAAGTAGTGGATTTTGAATTCAAAGAAGAAGATGAGAACTGGTAG
PROTEIN sequence
Length: 84
DESAVMKLFMLPNISTIGTVHSHPSGNRRPSGADLELFDRKGMYHIIVGEPFDASSWTCYDNSGKMIKLEVVDFEFKEEDENW*