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RifSed_csp1_19ft_2_scaffold_35358_20

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: comp(9917..10162)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.5
  • Coverage: 81.0
  • Bit_score: 129
  • Evalue 1.20e-27
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Methanosarcina mazei RepID=DAPA_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 77.0
  • Bit_score: 92
  • Evalue 2.00e-16
Dihydrodipicolinate synthase similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 77.0
  • Bit_score: 92
  • Evalue 5.60e-17

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 246
AGGCTTGTGGTCTCCATGGTAGAATCATTCCGGAAGGGCGATCTGGAAAAGGCAAGAGAGCTTCATCTTGCTCTTGCTCCCCTCATACGCGCCGCTTTTCTTGAGACAAACCCGATCCCGATAAAGAAGGCTGTGGAGATCATAGGGCTTCCTGCAGGAAATCTCAGGCTTCCACTTGCCCCGATCAGTCCTGAAAACGAGAAAAAACTAAGGGCTTCCCTTAACGACCTTCATCTTTTGAAGTGA
PROTEIN sequence
Length: 82
RLVVSMVESFRKGDLEKARELHLALAPLIRAAFLETNPIPIKKAVEIIGLPAGNLRLPLAPISPENEKKLRASLNDLHLLK*