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RifSed_csp1_19ft_2_scaffold_71204_2

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: 190..834

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S4 domain protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XA7_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 218.0
  • Bit_score: 243
  • Evalue 1.10e-61
Putative rRNA methylase {ECO:0000313|EMBL:KCZ70713.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 214.0
  • Bit_score: 319
  • Evalue 2.80e-84
RNA-binding S4 similarity KEGG
DB: KEGG
  • Identity: 56.9
  • Coverage: 218.0
  • Bit_score: 243
  • Evalue 3.10e-62

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 645
ATGAGGCTTGACTCTTATCTTGTAGAAATAGGCGATCTGGGTTCCCGTGGGCGAGCTAAACGAGCTATAGCGCAAGGACAGGTGATAGTGAATGGCAAGGTGATAACAAAACCATCTTATGATGTGGCGTATTCAGACGATATCGAAATAACAGAAGGCCTGGATAAACCCGCTGGCTACTGGAAACTCAAAGAGATACAGGAGAAGACCGGAATCATCAGGAAAGGCGACTGCGTGCTGGATATCGGTTCAAGCGCGGGAGGTTTCATTCTTTTTGCATCCGAGATCGCCTCTTGTGTCCACGGCATCGAGTTCAGCCATGAATTCCGCTCTGAACTTGGAAAACTGGCGCATGAACGCCCCAACGTGACAGTGGAATTCGGGGACGTATTAATGCCTTTTGAGAAGGAGAAATTCGATGTTCTGTTAATGGACATCACGGTAAGTCCTTTATCATCCATGATAGCCCTTGAGAATGTACTTCCAGCGTTAAAAAGCGGAGGCATGCTGATGCAGGTTCTGAAATTATCGAAAAAAGGAGATGGAGAACCGATAATAGGGAAGCTATCGACCCTGGGACTTGAGATCATTGATGTGCTTGAGCCTGAGAAAAAAGAAGCATATATCGTAGCAAGGAAGCTGTAA
PROTEIN sequence
Length: 215
MRLDSYLVEIGDLGSRGRAKRAIAQGQVIVNGKVITKPSYDVAYSDDIEITEGLDKPAGYWKLKEIQEKTGIIRKGDCVLDIGSSAGGFILFASEIASCVHGIEFSHEFRSELGKLAHERPNVTVEFGDVLMPFEKEKFDVLLMDITVSPLSSMIALENVLPALKSGGMLMQVLKLSKKGDGEPIIGKLSTLGLEIIDVLEPEKKEAYIVARKL*