ggKbase home page

RifSed_csp1_19ft_2_scaffold_74117_7

Organism: RifSed_csp1_19ft_2_Methanoperedens_42_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 17 / 38 MC: 1
Location: comp(2316..2762)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c biogenesis protein {ECO:0000313|EMBL:KCZ70755.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 148.0
  • Bit_score: 244
  • Evalue 6.10e-62
Cytochrome c biogenesis protein transmembrane region id=2499752 bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 152.0
  • Bit_score: 127
  • Evalue 6.00e-27
cytochrome c biogenesis transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 145.0
  • Bit_score: 122
  • Evalue 9.30e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 447
CATGCTGTGGGTAAGGCTGCCGGATTAATTTCTATCATACTTGGTGTGATAGTAATGAAGGATTTTTTCATACCAGGTAGTTCTTTTCTGGCAATACCCGGGAGCATGCACACATCAATAAACAACTGGATAAGACGCACCACAGTGCCCGGTGTCTTTGGAGCTGGCGTCCTTGTAGGTCTTTGCACAGTGCCGTGCAGCGGGGGCATATATCTTGCTGTCATAGGGTTATTGTCACTGCAATCCACGCTTGCTCAGGGCATATTGTACCTTTTGCTCTACAACCTGATGCTTATCGTGCCTCTAGTGGCAGTTCTTCTAGCCTCATCGAATAGGAAAGTAGTAGATAAAATGGTTACCTGGCAATCGAGGAATAAAACACGGATGAGACTGTTAATGGGCTCATTTATGGTAGCGATGGGATTTGTGATACTGCTGTTAATATGA
PROTEIN sequence
Length: 149
HAVGKAAGLISIILGVIVMKDFFIPGSSFLAIPGSMHTSINNWIRRTTVPGVFGAGVLVGLCTVPCSGGIYLAVIGLLSLQSTLAQGILYLLLYNLMLIVPLVAVLLASSNRKVVDKMVTWQSRNKTRMRLLMGSFMVAMGFVILLLI*