ggKbase home page

RifSed_csp2_16ft_2_scaffold_80568_16

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: 11291..12346

Top 3 Functional Annotations

Value Algorithm Source
recombinase A id=15191776 bin=GWC1_OP11_49_16_COMPLETE species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 73.4
  • Coverage: 342.0
  • Bit_score: 488
  • Evalue 3.20e-135
recA; recA protein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 343.0
  • Bit_score: 422
  • Evalue 6.00e-116
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 351.0
  • Bit_score: 677
  • Evalue 5.20e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1056
ATGTCGAAAAACAGCGACGCAGCGAATCGGCTCCAAGCGGTAAAAATCGCGATGGATCAGATTGAAAAACAATATGGCAAGGGGTCGATCATGAAGCTCGGCACCGCTCCCGGCAACGACCACCGCGTCTCATCAATCTCCACAGGTGCAATTGGACTGGATCTCGCGCTCGGCATCGGCGGCCTTCCGCGCGGACGCATCACGGAAGTTTTCGGGCCGGAAGCCAGCGGGAAAACCACATTGTGTCTCCACGTCATCGCCAACGCCCAAAAGTTGGGCGGCACGGCGGCGTTCATTGACGCGGAACACGCCCTGGATCCCCAGCGCGCAGCCGCGATCGGCGTCAACTTGGACGATCTTTTGGTATCCCAACCCGACACCGGTGAACAAGCCCTCGAGATAGCGGAAACCTTGATTAGATCCGGCGGATTGGATGTCATCTGCGTCGATTCCGTGGCGGCCTTGGTTCCCAGGGCGGAGATCGAAGGGGAAATGGGTGATTCGATGATCGGCGTTCAGGCGAGGCTTATGAGTCAGGCGATGCGCAAGCTCGCCGGTGCCATTGCCCGCTCCAAAACGGTCATCATCTTTACCAACCAGCTGCGTATGAAAATCGGCGTGATGTTCGGCAATCCGGAAACCACCACCGGCGGCCAAGCGTTGAAGTTTTACTCCTCAATCCGCATCGACATGCGCAAAATCGGCAATATTCAGGACGGCGAACAGATAGTCGGCTCCCGTCACCGGATCAAAGTCGTCAAAAATAAGGTTGCCCCTCCCTTCCGCATTACCGAACTTGACATCATGAATGACGCCGGAATTTCTTCAACGGGCAGCCTGGTTGATACGGCAACCGACTTGGGGATTATCGAAAAGTCAGGCAGCTTCCTCAAATATAAAGGAGAGGTTTTGGCTCAAGGCCGGGAATCCGCGAAGGAAATCCTGGGAGAAAATCACAAACTCGCCAAAGAAATTGAAGCGGAGATTCACAGATCTGTCCACGAAAAAAAAGAGAAAACCCCCAAAAGGGGTCGTCCCCCCAAAGAAAATAGTTAA
PROTEIN sequence
Length: 352
MSKNSDAANRLQAVKIAMDQIEKQYGKGSIMKLGTAPGNDHRVSSISTGAIGLDLALGIGGLPRGRITEVFGPEASGKTTLCLHVIANAQKLGGTAAFIDAEHALDPQRAAAIGVNLDDLLVSQPDTGEQALEIAETLIRSGGLDVICVDSVAALVPRAEIEGEMGDSMIGVQARLMSQAMRKLAGAIARSKTVIIFTNQLRMKIGVMFGNPETTTGGQALKFYSSIRIDMRKIGNIQDGEQIVGSRHRIKVVKNKVAPPFRITELDIMNDAGISSTGSLVDTATDLGIIEKSGSFLKYKGEVLAQGRESAKEILGENHKLAKEIEAEIHRSVHEKKEKTPKRGRPPKENS*