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RifSed_csp2_16ft_3_scaffold_4692_5

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 3344..3634

Top 3 Functional Annotations

Value Algorithm Source
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:KCZ71334.1}; EC=3.11.1.2 {ECO:0000313|EMBL:KCZ71334.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 96.0
  • Bit_score: 196
  • Evalue 1.20e-47
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZ21_METPS similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 92.0
  • Bit_score: 125
  • Evalue 1.50e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 92.0
  • Bit_score: 125
  • Evalue 4.20e-27

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 291
ATGACAAAATGCCCCCTATGCGAAACAGAGATGAGAAAAGAACGTAAGGAGATAGAAAAAGGCGTATGGGCTACTGTTGAGGTCTGCCCTCAATGCAAAGACGAATGGATAGATGAAAAAGAACATGACAGGCTTGTTGATCTATTCAAACGTAAAACTTTCAACCTCGGTGGCAGTATCGCGGTTAGGATACCCAAGGAAATAGCCGATGCCCTTTCCATAAAAGAAGGAACTGAAGTAAACTTCTCTGTGCAAGATAAAAAGATAATAATATCCAAGGCAACCGCGTAA
PROTEIN sequence
Length: 97
MTKCPLCETEMRKERKEIEKGVWATVEVCPQCKDEWIDEKEHDRLVDLFKRKTFNLGGSIAVRIPKEIADALSIKEGTEVNFSVQDKKIIISKATA*