ggKbase home page

RifSed_csp2_16ft_3_scaffold_20884_6

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: comp(3637..3972)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKS5_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 82.0
  • Bit_score: 75
  • Evalue 3.40e-11
Uncharacterized protein {ECO:0000313|EMBL:AKB78536.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 78
  • Evalue 5.70e-12
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 81.0
  • Bit_score: 76
  • Evalue 4.40e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 336
ATGCCTCATACACCTGCCAAAACCCACTCTAAAAAGAAAAACCCAAAAATTGCAGCCATCGCTTCATTTTTTATTCCAGGTCTTGGACAGATCTACAACGGAGAAATAAGAAAAGGCATAGGTTTTATTATAATTGCAATTTTATTTGTATCCCTGTGGTTGTTCCTGATACAGGAGCGTCATATGACAGGACCTATTGTGGTAGCAAGTGGAGCGTGTGTTCTGTTCTGGATCGGAAGTATGTATGATGCCTACAAGACTGCTAAAGATCTCTCAAGTATGATCCAGCAGGAGATGCCAGGACAGAGGGATAGATCCATGGATTTACTGAAATAA
PROTEIN sequence
Length: 112
MPHTPAKTHSKKKNPKIAAIASFFIPGLGQIYNGEIRKGIGFIIIAILFVSLWLFLIQERHMTGPIVVASGACVLFWIGSMYDAYKTAKDLSSMIQQEMPGQRDRSMDLLK*