ggKbase home page

RifSed_csp2_16ft_3_scaffold_20884_11

Organism: RifSed_csp2_16ft_3_Methanoperedens_45_12

near complete RP 32 / 55 MC: 3 BSCG 28 / 51 ASCG 37 / 38 MC: 1
Location: 7726..8886

Top 3 Functional Annotations

Value Algorithm Source
S-layer-related duplication domain protein Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQC8_METZD similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 313.0
  • Bit_score: 190
  • Evalue 2.00e-45
S-layer protein similarity KEGG
DB: KEGG
  • Identity: 34.5
  • Coverage: 313.0
  • Bit_score: 190
  • Evalue 5.50e-46
S-layer-related duplication domain protein {ECO:0000313|EMBL:AEH61594.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 313.0
  • Bit_score: 190
  • Evalue 2.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanosalsum zhilinae → Methanosalsum → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1161
ATGATCGGCACAGTCACAGCGATTGTAGCAATGCTTCTCATATGGGGTGCATCATTGATCACAGTGGATAACCAGGGCAACATGGATGATAGCAGAGTGAATAACTTAACACAACCGGAAATTCAGACCCCAAAAAGCGCTCCTGAATCAGACAGCAGATTGAATGACCTGACCCAACCGGAAACAGGTAATATCACACTCCTTGAAAAGCAATTTCGAATGCCAGTCAGCCCCCCTGGTTCACGCTATATATGGGATGGTGATGCCGGAGGCGGTTCGACTTTCAATTTGACTCCCATGAATTTTGATGGATTCTATTACGACCTTGATAATAACGCAGGCAGCGAATCATTCATCATATCTCTGGGAAATCCCAGAGATAAATCTATACAAGAAAACGATCTGAAATATTCAACAGCTGTTTCAAATATTCCATTCAAATACAGGTCATTTGGTAATTATACCATGATAGGGTTCATGGGAGAAAGATATTTTACAGGATATACGGATGACTCGAAGTTTGCTCATTCACCAGTGAACCTGTTAAATCACAGGATGCTCCTTGGAATTTTGATGGACGAAAACGCAAACCATACATTGACTGCAGGAAGCGGTATGGCACTGAGCGATGGTTATGCCATCCTGGTCAACAGTGTGAATATCGATGAAAGAACAGTACAGATATCTCTTAACAAAAATGGCGAAGAGATAGATAGCAGATCAGTCAAAGCAGGAGAAACGTATGTTTATAATAAAGATATCAGGAAAGTAAAAACAATAAGCGGCTACCTGTATGACACGAATATATCTGTCGGCAATCTACCGATCATTGCAATAAATATAGATTCAGTGCTATCAAAAGGGAATTTCCCTGCCATCACCATTAATGGGATTTTCCAGTTATCGGATACAGCAAAGATAGATCTTGAATCCGGTGATCACGGATTAATGAAAATAACGAATTTTTCTGATAATGGAATATCAATGGTAAATGCGGTCTCATTAGAACTGCGCTACCCTTACAGCACTGAGTTTGAGCGACATTCAAGTGGAATAATGGGTGATATGGGACTGGAAATAGCAGATTCGGATATTCTGAGATTCAGCGCAGTAAAAGATTCTGTAGGATACGGGAACCATGAGCGTCGTGGCGCTGTATAG
PROTEIN sequence
Length: 387
MIGTVTAIVAMLLIWGASLITVDNQGNMDDSRVNNLTQPEIQTPKSAPESDSRLNDLTQPETGNITLLEKQFRMPVSPPGSRYIWDGDAGGGSTFNLTPMNFDGFYYDLDNNAGSESFIISLGNPRDKSIQENDLKYSTAVSNIPFKYRSFGNYTMIGFMGERYFTGYTDDSKFAHSPVNLLNHRMLLGILMDENANHTLTAGSGMALSDGYAILVNSVNIDERTVQISLNKNGEEIDSRSVKAGETYVYNKDIRKVKTISGYLYDTNISVGNLPIIAINIDSVLSKGNFPAITINGIFQLSDTAKIDLESGDHGLMKITNFSDNGISMVNAVSLELRYPYSTEFERHSSGIMGDMGLEIADSDILRFSAVKDSVGYGNHERRGAV*