ggKbase home page

RifSed_csp2_19ft_3_scaffold_40264_8

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(3179..3958)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 218..235 id=22667 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3 similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 259.0
  • Bit_score: 250
  • Evalue 1.80e-63
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 257.0
  • Bit_score: 109
  • Evalue 8.30e-22
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 259.0
  • Bit_score: 496
  • Evalue 2.00e-137

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 780
ATGGAGAGAAAAGCAAGCGACCCGATTGCTTATTCAATAGTCTTTCAACTTCTGACGGGTTTGATTATTGGGTTTTATGGTTTTTTATTTGAAAACATGAGTTTCCCCGAAGTTATACCACTGGTAAACATTCTTTTAATGACTCTTCTTTGGACTTTTGCAAATATTTTTTCGTTCACGGCGTTAAAGCACATAGATGTTTCCCGTTTCACTGTAGTTTTTTCTTCTCGACTATTTTTTACGGTAGTAGCTTCAAGTTTATTTTTGAGCGAGTTTCTTACTGCGCAGCAGTGGTTAGGGGCAGTGCTGATTTTTGCCAGTATTTATGTTGTTACTCAAAAGTCTGGAGAAAAGTTTGCTTTAACAAAATATGACACGTTTTCAATACTGGCGGCTATGGCTTTTGGATTTGCAAATACCAACGATAGATTTATGTTGAAGACTTTTAATCTTTATCCATATGTATCAATTGCATTTATTTTCCCGGCTGTCTTTACAGCTTTAGTTAAACCCAAACATTTAAAATCCCTTCGGGTATTTGCAGACAAAACTATTTTTAAAAACATGGTTTTTCTTTGTTTGTTTTACACAGTCTCATCACTGACATTTTTCCGAGCATTACAAATTGCGCCGAATTCGTCGCAGGTTGTCGCAGTAAATTTGACTAGCGTGATACTTACAGTTTTATTAGCAATTGTGTTTTTGAAGGAAAGAGAAAATTTGAGGAGAAAAATTTTGGGCGCAGTGTTGAGCTTTATCGGGCTTTTGTTGGTTGGATAA
PROTEIN sequence
Length: 260
MERKASDPIAYSIVFQLLTGLIIGFYGFLFENMSFPEVIPLVNILLMTLLWTFANIFSFTALKHIDVSRFTVVFSSRLFFTVVASSLFLSEFLTAQQWLGAVLIFASIYVVTQKSGEKFALTKYDTFSILAAMAFGFANTNDRFMLKTFNLYPYVSIAFIFPAVFTALVKPKHLKSLRVFADKTIFKNMVFLCLFYTVSSLTFFRALQIAPNSSQVVAVNLTSVILTVLLAIVFLKERENLRRKILGAVLSFIGLLLVG*