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ACD10_158

Alias: ACD10_29714.3791.9

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_158_1

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2..328
DNA (327bp) protein (109aa)
crispr-associated endonuclease Cas1
Cas_Cas1 (db=HMMPfam db_id=PF01867 from=1 to=37 evalue=9.2e-08 interpro_id=IPR002729 interpro_description=CRISPR-associated protein Cas1)
Uncharacterized protein {ECO:0000313|EMBL:EKE17686.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9X7_ACIET
ACD10_158_2

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332..664
DNA (333bp) protein (111aa)
crispr-associated protein cas2
cas2: CRISPR-associated endoribonuclease Cas (db=HMMTigr db_id=TIGR01573 from=9 to=110 evalue=8.4e-30 interpro_id=IPR021127 interpro_description=CRISPR associated protein Cas2)
CRISPR_Cas2 (db=HMMPfam db_id=PF09827 from=9 to=86 evalue=1.0e-12 interpro_id=IPR019199 interpro_description=Virulence-associated protein D / CRISPR associated protein Cas2)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bac
ACD10_158_3

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comp(1591..1821)
DNA (231bp) protein (77aa)
CarR n=1 Tax=Roseovarius sp. TM1035 RepID=A6DUS0_9RHOB (db=UNIREF evalue=1.0e-10 bit_score=68.9 identity=41.89 coverage=94.8051948051948)
carR; hypothetical protein
CarR {ECO:0000313|EMBL:EKE17683.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CRISPR locus 821 - 959 (?) with repeat GAATTGTAGCTTTCCGGGGTGAGAGAGGGAGCTACAACCCTTCCAG Jill Banfield (11/14/12)
ACD10_158_4

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comp(1939..2541)
DNA (603bp) protein (201aa)
carR; hypothetical protein
CarR n=1 Tax=Roseovarius sp. TM1035 RepID=A6DUS0_9RHOB (db=UNIREF evalue=1.0e-23 bit_score=112.0 identity=48.73 coverage=97.0149253731343)
seg (db=Seg db_id=seg from=39 to=54)
seg (db=Seg db_id=seg from=142 to=161)
Jill Banfield (11/14/12)
ACD10_158_5

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comp(2511..2639)
DNA (129bp) protein (43aa)
seg (db=Seg db_id=seg from=2 to=20)
Uncharacterized protein {ECO:0000313|EMBL:EKE17685.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_158_6
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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2732..2920
DNA (189bp) protein (63aa)
Aldehyde dehydrogenase (NAD+) n=1 Tax=Polaromonas sp. JS666 RepID=Q122T9_POLSJ (db=UNIREF evalue=6.0e-31 bit_score=136.0 identity=96.77 coverage=96.8253968253968)
aldehyde dehydrogenase (EC:1.2.1.3)
ALDEHYDE DEHYDROGENASE (db=HMMPanther db_id=PTHR11699:SF46 from=1 to=62 evalue=2.2e-28)
ALDEHYDE DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR11699 from=1 to=62 evalue=2.2e-28 interpro_id=IPR015590 interpro_description=Aldehyde dehydrogenase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD10_158_7

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3120..3416
DNA (297bp) protein (99aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HB8_DECAR (db=UNIREF evalue=6.0e-43 bit_score=176.0 identity=81.63 coverage=97.979797979798)
DUF779 (db=HMMPfam db_id=PF05610 from=1 to=83 evalue=1.1e-38 interpro_id=IPR008497 interpro_description=Protein of unknown function DUF779)
Uncharacterised conserved protein, UCP009151 type (db=HMMPIR db_id=PIRSF009151 from=1 to=98 evalue=3.3e-36 interpro_id=IPR008497 interpro_description=Protein of unknown function DUF779)
ACD10_158_8

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3454..3783
DNA (330bp) protein (110aa)
cytochrome c, class I
Cytochrome c, class I n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HB9_DECAR (db=UNIREF evalue=4.0e-31 bit_score=136.0 identity=80.49 coverage=73.6363636363636)
seg (db=Seg db_id=seg from=5 to=24)
no description (db=Gene3D db_id=G3DSA:1.10.760.10 from=25 to=109 evalue=1.2e-24 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
One CxxCH Jill Banfield (11/14/12)
Displaying 8 items

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