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ACD10_159

Alias: ACD10_8270.2445.23

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_159_1

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comp(122..352)
DNA (231bp) protein (77aa)
122..352 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE16775.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_159_2

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comp(349..624)
DNA (276bp) protein (92aa)
seg (db=Seg db_id=seg from=67 to=82)
Uncharacterized protein {ECO:0000313|EMBL:EKE16776.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_159_3

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1296..1469
DNA (174bp) protein (58aa)
Nitrogen assimilation regulatory protein NtrX n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V665_9RHOB (db=UNIREF evalue=2.0e-19 bit_score=97.8 identity=94.0 coverage=84.4827586206897)
ntrX; nitrogen assimilation regulatory protein NtrX
HTH_8 (db=HMMPfam db_id=PF02954 from=2 to=37 evalue=1.0e-10 interpro_id=IPR002197 interpro_description=Helix-turn-helix, Fis-type GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Homeodomain-like (db=superfamily db_id=SSF46689 from=2 to=41 evalue=9.6e-09 interpro_id=IPR009057 interpro_description=Homeodomain-like)
ACD10_159_4
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1586..1819
DNA (234bp) protein (78aa)
Protein hfq n=6 Tax=Rhodobacterales RepID=HFQ_RHOS1 (db=UNIREF evalue=4.0e-37 bit_score=156.0 identity=94.81 coverage=97.4358974358974)
hfq; RNA chaperone Hfq
Hfq: RNA chaperone Hfq (db=HMMTigr db_id=TIGR02383 from=6 to=66 evalue=3.8e-44 interpro_id=IPR005001 interpro_description=Host factor Hfq GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:2.30.30.100 from=2 to=77 evalue=3.2e-28)
ACD10_159_5

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1951..2490
DNA (540bp) protein (180aa)
HSR1-like GTP-binding protein
seg (db=Seg db_id=seg from=128 to=137)
GTP-BINDING PROTEIN HFLX (db=HMMPanther db_id=PTHR10229 from=45 to=180 evalue=1.7e-43)
Uncharacterized protein {ECO:0000313|EMBL:EKE16774.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

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