ggKbase home page

ACD10_239

Alias: ACD10_173493.2019.7

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_239_1

Not on your lists

275..601
DNA (327bp) protein (109aa)
extra-cytoplasmic solute receptor family protein 173
Bug (db=HMMPfam db_id=PF03401 from=6 to=104 evalue=1.9e-22 interpro_id=IPR005064 interpro_description=Bordetella uptake gene GO=Cellular Component: outer membrane-bounded periplasmic space (GO:0030288))
Extra-cytoplasmic solute receptor family protein 173 {ECO:0000313|EMBL:EKE18109.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Extra-cytoplasmic solute receptor family protein 173 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLQ1_ACHXA
ACD10_239_2

Not on your lists

613..861
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=27 to=61)
Uncharacterized protein {ECO:0000313|EMBL:EKE18110.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD10_239_3

Not on your lists

comp(882..1772)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator
LysR_substrate (db=HMMPfam db_id=PF03466 from=94 to=291 evalue=3.0e-40 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=90 to=294 evalue=1.1e-38)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=115 evalue=7.4e-24)
ACD10_239_4

Not on your lists

1860..2051
DNA (192bp) protein (64aa)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=1 to=64 evalue=2.0e-15)
no description (db=Gene3D db_id=G3DSA:3.90.226.10 from=3 to=64 evalue=3.3e-10)
ECH (db=HMMPfam db_id=PF00378 from=18 to=64 evalue=4.7e-08 interpro_id=IPR001753 interpro_description=Crotonase, core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ENOYL-COA HYDRATASE-RELATED (db=HMMPanther db_id=PTHR11941 from=10 to=64 evalue=2.1e-07)
Displaying 4 items

View Taxonomy