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ACD10_299

Alias: ACD10_53224.1983.15

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_299_1

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comp(3..365)
DNA (363bp) protein (121aa)
response regulator receiver:transcriptional regulatory protein, C-terminal
Response regulator receiver:Transcriptional regulatory protein, C-terminal n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BA5_DECAR (db=UNIREF evalue=7.0e-52 bit_score=205.0 identity=95.28 coverage=86.7768595041322)
seg (db=Seg db_id=seg from=107 to=120)
no description (db=HMMSmart db_id=SM00448 from=3 to=113 evalue=1.0e-36 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD10_299_2

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506..997
DNA (492bp) protein (164aa)
disulphide bond formation protein DsbB
Disulfide bond formation protein B n=1 Tax=Dechloromonas aromatica RCB RepID=DSBB_DECAR (db=UNIREF evalue=1.0e-49 bit_score=198.0 identity=71.6 coverage=98.1707317073171)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
ACD10_299_3

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comp(1086..1253)
DNA (168bp) protein (56aa)
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 n=1 Tax=Methylibium petroleiphilum PM1 RepID=RL33_METPP (db=UNIREF evalue=2.0e-19 bit_score=98.2 identity=85.45 coverage=96.4285714285714)
RIBOSOMAL_L33 (db=PatternScan db_id=PS00582 from=21 to=40 evalue=0.0 interpro_id=IPR018264 interpro_description=Ribosomal protein L33, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmG_bact: ribosomal protein L33 (db=HMMTigr db_id=TIGR01023 from=1 to=55 evalue=1.4e-30 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD10_299_4

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comp(1273..1506)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Dechloromonas aromatica RCB RepID=RL28_DECAR (db=UNIREF evalue=1.0e-35 bit_score=151.0 identity=93.51 coverage=97.4358974358974)
rpmB; 50S ribosomal protein L28
L28: ribosomal protein L28 (db=HMMTigr db_id=TIGR00009 from=1 to=58 evalue=9.5e-34 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L28 (db=HMMPfam db_id=PF00830 from=3 to=63 evalue=1.1e-30 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD10_299_5
ACD12, ACD12, ACD12, ACD12, Microgenomates, Bacteria

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1868..2020
DNA (153bp) protein (51aa)
1868..2020 + (rbs_motif=None rbs_spacer=None)
Displaying 5 items

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