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ACD10_368

Alias: ACD10_45234.3136.11

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_368_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..956
DNA (954bp) protein (318aa)
RpoD family RNA polymerase sigma factor
RNA polymerase sigma factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5D8_ACIDE (db=UNIREF evalue=1.0e-149 bit_score=532.0 identity=97.09 coverage=96.8553459119497)
seg (db=Seg db_id=seg from=110 to=125)
seg (db=Seg db_id=seg from=84 to=104)
ACD10_368_2

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943..1731
DNA (789bp) protein (263aa)
RNA polymerase sigma factor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5D8_ACIDE (db=UNIREF evalue=1.0e-150 bit_score=535.0 identity=98.47 coverage=99.2395437262358)
RpoD family RNA polymerase sigma factor
coiled-coil (db=Coil db_id=coil from=221 to=242 evalue=NA)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=220 to=246 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD10_368_3

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1762..2103
DNA (342bp) protein (114aa)
hydrogenase nickel insertion protein HypA
HYPA (db=PatternScan db_id=PS01249 from=34 to=76 evalue=0.0 interpro_id=IPR020538 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF, conserved site)
hypA: hydrogenase nickel insertion protein H (db=HMMTigr db_id=TIGR00100 from=1 to=113 evalue=1.9e-36 interpro_id=IPR000688 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF GO=Biological Process: protein modification process (GO:0006464), Molecular Function: nickel ion binding (GO:0016151))
HypA (db=HMMPfam db_id=PF01155 from=1 to=112 evalue=6.0e-36 interpro_id=IPR000688 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF GO=Biological Process: protein modification process (GO:0006464), Molecular Function: nickel ion binding (GO:0016151))
ACD10_368_4

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2146..2994
DNA (849bp) protein (283aa)
hydrogenase accessory protein HypB
hydrogenase accessory protein HypB
Hydrogenase accessory protein HypB n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R09_RHOFD (db=UNIREF evalue=4.0e-109 bit_score=397.0 identity=75.32 coverage=98.9399293286219)
seg (db=Seg db_id=seg from=50 to=65)
ACD10_368_5

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3005..3172
DNA (168bp) protein (56aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21R08_RHOFD (db=UNIREF evalue=8.0e-16 bit_score=85.9 identity=73.47 coverage=85.7142857142857)
(NiFe) hydrogenase maturation protein HypF
ACYLPHOSPHATASE_1 (db=PatternScan db_id=PS00150 from=8 to=18 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
Acylphosphatase (db=HMMPfam db_id=PF00708 from=1 to=50 evalue=1.2e-19 interpro_id=IPR001792 interpro_description=Acylphosphatase-like)
Displaying 5 items

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