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ACD10_37

Alias: ACD10_3729.4750.28

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_37_1

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comp(1..501)
DNA (501bp) protein (167aa)
1..501 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE17539.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_37_2

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980..1165
DNA (186bp) protein (62aa)
ParB domain protein nuclease n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CRT9_9RHOB (db=UNIREF evalue=2.0e-09 bit_score=64.7 identity=48.28 coverage=91.9354838709677)
ParB protein {ECO:0000313|EMBL:EKE17533.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_37_3

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1224..1445
DNA (222bp) protein (74aa)
1224..1445 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE17534.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_37_4

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1442..1891
DNA (450bp) protein (150aa)
RelE protein n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IKD5_BART1 (db=UNIREF evalue=5.0e-30 bit_score=133.0 identity=55.75 coverage=74.6666666666667)
higB-2; Toxin HigB-2
DUF1044 (db=HMMPfam db_id=PF06296 from=36 to=134 evalue=8.4e-09)
RelE protein {ECO:0000313|EMBL:EKE17535.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_37_5

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1893..2177
DNA (285bp) protein (95aa)
helix-turn-helix family protein
HTH_3 (db=HMMPfam db_id=PF01381 from=36 to=77 evalue=4.4e-09 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=35 to=78 evalue=4.7e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=34 to=88 evalue=2.5e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD10_37_6

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2443..2958
DNA (516bp) protein (172aa)
2443..2958 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE17537.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_37_7

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3020..3358
DNA (339bp) protein (113aa)
putative single-stranded DNA-binding protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=9 to=101 evalue=2.5e-09 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=21 to=100 evalue=2.1e-06 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=21 to=109 evalue=5.4e-06 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
ACD10_37_8

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comp(3467..3952)
DNA (486bp) protein (162aa)
putative Staphylococcus nuclease-like protein (SNase-like)
Succinoglycan biosynthesis protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRL0_9RHOB (db=UNIREF evalue=6.0e-36 bit_score=152.0 identity=55.47 coverage=83.9506172839506)
seg (db=Seg db_id=seg from=70 to=80)
seg (db=Seg db_id=seg from=8 to=21)
ACD10_37_9

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comp(3949..4380)
DNA (432bp) protein (144aa)
UPF0110 family protein
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=143 evalue=2.4e-10)
PIN (db=HMMPfam db_id=PF01850 from=1 to=140 evalue=4.9e-10 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKE17531.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_37_10

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comp(4380..4622)
DNA (243bp) protein (81aa)
PSK_trans_fac (db=HMMPfam db_id=PF07704 from=1 to=76 evalue=9.4e-09 interpro_id=IPR011660 interpro_description=Rv0623-like transcription factor)
Uncharacterized protein {ECO:0000313|EMBL:EKE17532.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 10 items

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