ggKbase home page

ACD10_396

Alias: ACD23_737.14693.24

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_396_1

Not on your lists

comp(78..1556)
DNA (1479bp) protein (493aa)
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit N n=1 Tax=Dechloromonas aromatica RCB RepID=NUON_DECAR (db=UNIREF evalue=0.0 bit_score=762.0 identity=86.84 coverage=99.5943204868154)
transmembrane_regions (db=TMHMM db_id=tmhmm from=338 to=360)
ACD10_396_2

Not on your lists

comp(1569..3053)
DNA (1485bp) protein (495aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase subunit M (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HG4_DECAR (db=UNIREF evalue=0.0 bit_score=868.0 identity=91.5 coverage=99.5959595959596)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
ACD10_396_3

Not on your lists

comp(3086..5110)
DNA (2025bp) protein (675aa)
NADH-plastoquinone oxidoreductase, chain 5
NADH-plastoquinone oxidoreductase, chain 5
NADH-plastoquinone oxidoreductase, chain 5 n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HG5_DECAR (db=UNIREF evalue=0.0 bit_score=1061.0 identity=85.34 coverage=99.4074074074074)
transmembrane_regions (db=TMHMM db_id=tmhmm from=137 to=159)
ACD10_396_4

Not on your lists

comp(5113..5424)
DNA (312bp) protein (104aa)
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Dechloromonas aromatica RCB RepID=NUOK_DECAR (db=UNIREF evalue=8.0e-34 bit_score=145.0 identity=93.2 coverage=98.0769230769231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
ACD10_396_5

Not on your lists

comp(5441..6037)
DNA (597bp) protein (199aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HG7_DECAR (db=UNIREF evalue=2.0e-81 bit_score=304.0 identity=89.9 coverage=98.9949748743718)
seg (db=Seg db_id=seg from=98 to=111)
ACD10_396_6

Not on your lists

comp(6050..6538)
DNA (489bp) protein (163aa)
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH dehydrogenase subunit I (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit I n=1 Tax=Dechloromonas aromatica RCB RepID=NUOI_DECAR (db=UNIREF evalue=7.0e-86 bit_score=318.0 identity=95.68 coverage=98.7730061349693)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=63 to=74 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD10_396_7

Not on your lists

comp(6549..7598)
DNA (1050bp) protein (350aa)
respiratory-chain NADH dehydrogenase, subunit 1
respiratory-chain NADH dehydrogenase, subunit 1
NADH-quinone oxidoreductase subunit H n=1 Tax=Dechloromonas aromatica RCB RepID=NUOH_DECAR (db=UNIREF evalue=1.0e-157 bit_score=559.0 identity=90.54 coverage=99.4285714285714)
seg (db=Seg db_id=seg from=170 to=184)
ACD10_396_8

Not on your lists

comp(7599..7805)
DNA (207bp) protein (69aa)
NADH dehydrogenase subunit G (EC:1.6.5.3)
Uncharacterized protein {ECO:0000313|EMBL:EKE16579.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADH dehydrogenase subunit G n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HH0_DECAR
ACD10_396_9

Not on your lists

9497..9751
DNA (255bp) protein (85aa)
9497..9751 + (rbs_motif=AGxAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE16565.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_396_10

Not on your lists

comp(10070..11398)
DNA (1329bp) protein (443aa)
NADH-quinone oxidoreductase, F subunit n=1 Tax=Dechloromonas aromatica RCB RepID=Q47HH1_DECAR (db=UNIREF evalue=0.0 bit_score=858.0 identity=91.63 coverage=99.548532731377)
NADH-quinone oxidoreductase, F subunit
NADH-quinone oxidoreductase, F subunit
COMPLEX1_51K_2 (db=PatternScan db_id=PS00645 from=346 to=357 evalue=0.0 interpro_id=IPR001949 interpro_description=NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: FMN binding (GO:0010181), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD10_396_11

Not on your lists

comp(11398..11871)
DNA (474bp) protein (158aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
COMPLEX1_24K (db=PatternScan db_id=PS01099 from=113 to=131 evalue=0.0 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
nuoE_fam: NADH-quinone oxidoreductase, E sub (db=HMMTigr db_id=TIGR01958 from=9 to=157 evalue=2.9e-84 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
Thioredoxin-like (db=superfamily db_id=SSF52833 from=2 to=157 evalue=5.7e-52 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD10_396_12

Not on your lists

comp(11871..13124)
DNA (1254bp) protein (418aa)
NADH-quinone oxidoreductase subunit D n=1 Tax=Dechloromonas aromatica RCB RepID=NUOD_DECAR (db=UNIREF evalue=0.0 bit_score=828.0 identity=92.81 coverage=99.5215311004785)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit D (EC:1.6.5.3)
COMPLEX1_49K (db=PatternScan db_id=PS00535 from=43 to=54 evalue=0.0 interpro_id=IPR014029 interpro_description=NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site)
ACD10_396_13

Not on your lists

comp(13117..13722)
DNA (606bp) protein (202aa)
NADH-quinone oxidoreductase subunit C n=1 Tax=Dechloromonas aromatica RCB RepID=NUOC_DECAR (db=UNIREF evalue=5.0e-98 bit_score=359.0 identity=84.08 coverage=99.009900990099)
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH dehydrogenase subunit C (EC:1.6.5.3)
COMPLEX1_30K (db=PatternScan db_id=PS00542 from=121 to=142 evalue=0.0 interpro_id=IPR020396 interpro_description=NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site)
ACD10_396_14

Not on your lists

comp(13742..14218)
DNA (477bp) protein (159aa)
NADH-quinone oxidoreductase subunit B
seg (db=Seg db_id=seg from=105 to=118)
COMPLEX1_20K (db=PatternScan db_id=PS01150 from=118 to=134 evalue=0.0 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
nuoB_fam: NADH-quinone oxidoreductase, B sub (db=HMMTigr db_id=TIGR01957 from=10 to=153 evalue=7.3e-125 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD10_396_15

Not on your lists

comp(14222..14593)
DNA (372bp) protein (124aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Displaying 15 items

View Taxonomy