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ACD10_52

Alias: ACD10_50464.6391.14

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_52_1

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comp(38..484)
DNA (447bp) protein (149aa)
50S ribosomal protein L9
50S ribosomal protein L9 n=1 Tax=Dechloromonas aromatica RCB RepID=RL9_DECAR (db=UNIREF evalue=2.0e-60 bit_score=234.0 identity=85.14 coverage=98.6577181208054)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
L9: ribosomal protein L9 (db=HMMTigr db_id=TIGR00158 from=1 to=148 evalue=2.2e-44 interpro_id=IPR020594 interpro_description=Ribosomal protein L9, bacteria/chloroplast GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD10_52_2

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comp(500..775)
DNA (276bp) protein (92aa)
30S ribosomal protein S18
30S ribosomal protein S18 n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GQ7_DECAR (db=UNIREF evalue=4.0e-28 bit_score=127.0 identity=96.77 coverage=66.304347826087)
seg (db=Seg db_id=seg from=3 to=29)
RIBOSOMAL_S18 (db=PatternScan db_id=PS00057 from=37 to=60 evalue=0.0 interpro_id=IPR018275 interpro_description=Ribosomal protein S18, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD10_52_3

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comp(1109..1501)
DNA (393bp) protein (131aa)
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Dechloromonas aromatica RCB RepID=RS6_DECAR (db=UNIREF evalue=2.0e-59 bit_score=231.0 identity=93.04 coverage=87.0229007633588)
seg (db=Seg db_id=seg from=116 to=130)
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=104 evalue=1.5e-36 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD10_52_4

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comp(1614..2480)
DNA (867bp) protein (289aa)
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GR0_DECAR (db=UNIREF evalue=8.0e-137 bit_score=489.0 identity=84.38 coverage=99.3079584775086)
acyl-CoA dehydrogenase
acyl-CoA dehydrogenase
transmembrane_regions (db=TMHMM db_id=tmhmm from=207 to=229)
ACD10_52_5

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2815..3075
DNA (261bp) protein (87aa)
2815..3075 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE17176.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_52_6

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comp(3459..5216)
DNA (1758bp) protein (586aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GR1_DECAR (db=UNIREF evalue=7.0e-160 bit_score=567.0 identity=54.39 coverage=99.6587030716723)
coiled-coil (db=Coil db_id=coil from=247 to=268 evalue=NA)
ACD10_52_7

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comp(5260..5724)
DNA (465bp) protein (155aa)
hypothetical protein
Probable integral membrane protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47GR2_DECAR (db=UNIREF evalue=3.0e-54 bit_score=213.0 identity=75.82 coverage=98.0645161290323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
ACD10_52_8

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5816..5971
DNA (156bp) protein (52aa)
5816..5971 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE17175.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_52_9
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6038..6172)
DNA (135bp) protein (45aa)
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region n=1 Tax=Dechloromonas aromatica RCB RepID=Q47JJ5_DECAR (db=UNIREF evalue=6.0e-13 bit_score=76.3 identity=100.0 coverage=75.5555555555556)
acyl-CoA dehydrogenase
AcylCoA_DH_N (db=HMMPfam db_id=PF12418 from=2 to=32 evalue=1.5e-14 interpro_id=IPR020953 interpro_description=Acyl-CoA dehydrogenase, N-terminal, bacteria)
Tax=BJP_IG2103_Dechloromonas_60_92
ACD10_52_10

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comp(6198..6428)
DNA (231bp) protein (77aa)
Probable electron transfer flavoprotein, alpha subunit n=3 Tax=Azoarcus sp. BH72 RepID=A1K662_AZOSB (db=UNIREF evalue=3.0e-34 bit_score=147.0 identity=93.42 coverage=97.4025974025974)
etfA1; electron transfer flavoprotein subunit alpha
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
ETF_ALPHA (db=PatternScan db_id=PS00696 from=20 to=46 evalue=0.0 interpro_id=IPR018206 interpro_description=Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site)
Displaying 10 items

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