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ACD10_60

Alias: ACD10_16798.4076.11

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_60_1

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comp(99..1664)
DNA (1566bp) protein (522aa)
phage integrase family protein
Phage integrase family protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G635_GEOUR (db=UNIREF evalue=1.0e-62 bit_score=244.0 identity=34.54 coverage=78.3524904214559)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=257 to=443 evalue=7.4e-19 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Phage_integrase (db=HMMPfam db_id=PF00589 from=258 to=432 evalue=2.2e-14 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD10_60_2

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comp(2028..2462)
DNA (435bp) protein (145aa)
Ornithine cyclodeaminase n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWJ5_9RHOB (db=UNIREF evalue=7.0e-62 bit_score=238.0 identity=78.1 coverage=93.7931034482759)
ornithine cyclodeaminase
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=5 to=144 evalue=3.8e-39)
ORNITHINE CYCLODEAMINASE-RELATED (db=HMMPanther db_id=PTHR13812 from=13 to=144 evalue=6.5e-36 interpro_id=IPR003462 interpro_description=Ornithine cyclodeaminase/mu-crystallin)
ACD10_60_3

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2686..3054
DNA (369bp) protein (123aa)
2686..3054 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE18134.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_60_4

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comp(2976..3602)
DNA (627bp) protein (209aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CNT2_9RHOB (db=UNIREF evalue=7.0e-74 bit_score=280.0 identity=65.52 coverage=96.6507177033493)
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein
HAD-like (db=superfamily db_id=SSF56784 from=5 to=195 evalue=4.3e-32)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=88 to=187 evalue=4.5e-14)
ACD10_60_5

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comp(3574..4113)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWJ7_9RHOB (db=UNIREF evalue=2.0e-49 bit_score=197.0 identity=62.5 coverage=92.7777777777778)
putative drug/metabolite superfamily transporter
seg (db=Seg db_id=seg from=92 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=160)
Displaying 5 items

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