ggKbase home page

ACD10_87

Alias: ACD10_46144.2512.9

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD10_87_1

Not on your lists

3..458
DNA (456bp) protein (152aa)
Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p n=1 Tax=Dechloromonas aromatica RCB RepID=Q47B92_DECAR (db=UNIREF evalue=7.0e-69 bit_score=262.0 identity=83.44 coverage=98.6842105263158)
Fmu (Sun)/nucleolar NOL1/Nop2p
NOL1_NOP2_SUN (db=PatternScan db_id=PS01153 from=29 to=40 evalue=0.0 interpro_id=IPR018314 interpro_description=Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: methyltransferase activity (GO:0008168))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=150 evalue=1.5e-38)
ACD10_87_2

Not on your lists

comp(956..1171)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=51 to=63)
Uncharacterized protein {ECO:0000313|EMBL:EKE17257.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD10_87_3

Not on your lists

1439..1780
DNA (342bp) protein (114aa)
MscS Mechanosensitive ion channel n=1 Tax=Dechloromonas aromatica RCB RepID=Q47B93_DECAR (db=UNIREF evalue=1.0e-39 bit_score=164.0 identity=67.89 coverage=94.7368421052632)
MscS mechanosensitive ion channel
Mechanosensitive channel protein MscS (YggB), C-terminal domain (db=superfamily db_id=SSF82689 from=7 to=109 evalue=2.8e-27 interpro_id=IPR011066 interpro_description=Mechanosensitive ion channel MscS, C-terminal GO=Cellular Component: membrane (GO:0016020))
MS_channel (db=HMMPfam db_id=PF00924 from=2 to=98 evalue=1.6e-12 interpro_id=IPR006685 interpro_description=Mechanosensitive ion channel MscS GO=Cellular Component: membrane (GO:0016020), Biological Process: transmembrane transport (GO:0055085))
ACD10_87_4

Not on your lists

comp(2085..2264)
DNA (180bp) protein (60aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47BA3_DECAR (db=UNIREF evalue=1.0e-09 bit_score=65.5 identity=72.41 coverage=95.0)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=53)
ACD10_87_5

Not on your lists

comp(2264..2548)
DNA (285bp) protein (95aa)
2264..2548 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE17255.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

View Taxonomy