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ACDDEL_2

Alias: ACDDEL_3184.11061.12

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDDEL_2_1
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..341)
DNA (339bp) protein (113aa)
S-isoprenylcysteine methyltransferase-like protein
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G5B5_GEOUR (db=UNIREF evalue=5.0e-13 bit_score=76.6 identity=38.89 coverage=94.6902654867257)
seg (db=Seg db_id=seg from=82 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACDDEL_2_2
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(367..759)
DNA (393bp) protein (131aa)
Response regulator receiver protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M0Q5_GEOSF (db=UNIREF evalue=6.0e-16 bit_score=86.3 identity=36.43 coverage=97.7099236641221)
response regulator receiver protein
CheY-like (db=superfamily db_id=SSF52172 from=1 to=100 evalue=1.9e-13 interpro_id=IPR011006 interpro_description=CheY-like)
Response_reg (db=HMMPfam db_id=PF00072 from=6 to=91 evalue=5.0e-13 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACDDEL_2_3
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(834..1508)
DNA (675bp) protein (225aa)
ABC transporter related n=2 Tax=Geobacter RepID=A5GDP8_GEOUR (db=UNIREF evalue=3.0e-118 bit_score=427.0 identity=93.27 coverage=98.6666666666667)
ABC transporter-like protein
ABC transporter-like protein
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=4 to=220 evalue=8.6e-105)
ACDDEL_2_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1521..2681)
DNA (1161bp) protein (387aa)
Putative uncharacterized protein n=2 Tax=Geobacter RepID=B5EDI4_GEOBB (db=UNIREF evalue=0.0 bit_score=697.0 identity=87.05 coverage=99.4832041343669)
hypothetical protein
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=304 to=326)
ACDDEL_2_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2681..3145)
DNA (465bp) protein (155aa)
hypothetical protein
Membrane protein-like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GDP6_GEOUR (db=UNIREF evalue=9.0e-73 bit_score=275.0 identity=83.12 coverage=98.7096774193548)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
DUF2318 (db=HMMPfam db_id=PF10080 from=50 to=154 evalue=2.8e-36 interpro_id=IPR018758 interpro_description=Protein of unknown function DUF2318, membrane)
ACDDEL_2_6
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3161..3466)
DNA (306bp) protein (102aa)
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GDP5_GEOUR (db=UNIREF evalue=5.0e-20 bit_score=99.8 identity=80.26 coverage=73.5294117647059)
seg (db=Seg db_id=seg from=77 to=97)
seg (db=Seg db_id=seg from=24 to=35)
ACDDEL_2_7
unknown

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comp(3495..3662)
DNA (168bp) protein (56aa)

This feature has no annotations

ACDDEL_2_8
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3839..4087)
DNA (249bp) protein (83aa)
hypothetical protein (db=KEGG evalue=5.0e-12 bit_score=73.2 identity=56.36 coverage=65.0602409638554)
IS1016 family transposase n=2 Tax=Moraxella catarrhalis RepID=F1W7J4_MORCA
ACDDEL_2_9
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4822..5379)
DNA (558bp) protein (186aa)
ABC transporter permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=GWC2_Geobacteraceae_55_20_curated
ABC transporter, membrane protein n=3 Tax=Geobacter RepID=B5EDI4_GEOBB
ACDDEL_2_10
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5379..5843)
DNA (465bp) protein (155aa)
hypothetical protein
Membrane protein-like protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GDP6_GEOUR (db=UNIREF evalue=6.0e-52 bit_score=206.0 identity=74.03 coverage=98.7096774193548)
seg (db=Seg db_id=seg from=72 to=83)
seg (db=Seg db_id=seg from=9 to=26)
ACDDEL_2_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5856..6293)
DNA (438bp) protein (146aa)
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GDP5_GEOUR (db=UNIREF evalue=3.0e-41 bit_score=170.0 identity=78.05 coverage=83.5616438356164)
seg (db=Seg db_id=seg from=64 to=77)
seg (db=Seg db_id=seg from=124 to=145)
ACDDEL_2_12
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6313..6573)
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=8 to=13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
NMN_transporter (db=HMMPfam db_id=PF04973 from=12 to=78 evalue=5.3e-05 interpro_id=IPR006419 interpro_description=Nicotinamide mononucleotide transporter PnuC GO=Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
ACDDEL_2_13
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6896..9271)
DNA (2376bp) protein (792aa)
spermine synthase rbh
spermine synthase rbh
Spermine synthase n=1 Tax=Geobacter lovleyi SZ RepID=B3E356_GEOLS (db=UNIREF evalue=0.0 bit_score=928.0 identity=63.08 coverage=98.6111111111111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
ACDDEL_2_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9613..10398)
DNA (786bp) protein (262aa)
Parallel beta-helix repeat protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M516_GEOSF (db=UNIREF evalue=1.0e-65 bit_score=253.0 identity=51.11 coverage=85.4961832061069)
Parallel beta-helix repeat protein
seg (db=Seg db_id=seg from=9 to=20)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=41 to=229 evalue=3.8e-13 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
ACDDEL_2_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10877..11098)
DNA (222bp) protein (74aa)
hypothetical protein (db=KEGG evalue=2.0e-21 bit_score=104.0 identity=68.92 coverage=98.6486486486486)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5GDR1_GEOUR (db=UNIREF evalue=2.0e-21 bit_score=104.0 identity=68.92 coverage=98.6486486486486)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Displaying 15 items

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