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ACD1_18_5

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(2578..3024)

Top 3 Functional Annotations

Value Algorithm Source
smpB; ssrA RNA (tmRNA)-binding protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 149.0
  • Bit_score: 153
  • Evalue 3.80e-35
SSRP (db=PatternScan db_id=PS01317 from=22 to=34 evalue=0.0 interpro_id=IPR020081 interpro_description=SsrA-binding protein, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=3 to=146 evalue=1.6e-65 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-65

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Taxonomy

GWE2_OD1_36_40 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGCCGACATTAGCCACGAACAAAAGAGCGTTTTTCGATTATGAGCTTTTTGATAAATACGAAGCTGGTTTAATGCTGAACGGAGGAGAGGTAAAATCAGCAAAAGCAGCTCATATAAGCCTCAAAGGAAGCTTTGTAACAATCCATGCCAATGAGATGTATCTAACGAACGCTACCATTTCGAAATATCCCTTTTCTGACCCCAAAATTGCTTATGACCCAACTCGCAGTCGCAAGCTGTTAATAAAGAAAGCCGAAATCAAGTCCCTGGTTGGAAAAATGCACGTAAAAGGCTTGACATTGGTGCCTCTTCGTGTGTATACTAAGAGACGACTCATTAAGTTGGAATTCGCTGTGGCAAAAGGAAAAAAGGCCCACGATAAGCGATCAGACATAGCCGAAAGGGAGTCGAAGAGAGAGATGAATAGGAGACTTAAAAGCAATTAG
PROTEIN sequence
Length: 149
MPTLATNKRAFFDYELFDKYEAGLMLNGGEVKSAKAAHISLKGSFVTIHANEMYLTNATISKYPFSDPKIAYDPTRSRKLLIKKAEIKSLVGKMHVKGLTLVPLRVYTKRRLIKLEFAVAKGKKAHDKRSDIAERESKREMNRRLKSN*