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ACD20_1

Alias: ACD20_52423.15315.14

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_1_1

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1..423
DNA (423bp) protein (141aa)
seg (db=Seg db_id=seg from=28 to=49)
Fibronectin type III (db=superfamily db_id=SSF49265 from=36 to=139 evalue=1.1e-07 interpro_id=IPR008957 interpro_description=Fibronectin, type III-like fold)
FN3 (db=ProfileScan db_id=PS50853 from=45 to=138 evalue=12.304 interpro_id=IPR003961 interpro_description=Fibronectin, type III)
Uncharacterized protein {ECO:0000313|EMBL:EKE02918.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_1_2

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620..1903
DNA (1284bp) protein (428aa)
glycosyl transferase 4
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF33 from=2 to=419 evalue=9.6e-73)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=419 evalue=9.6e-73)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=422 evalue=3.3e-70)
ACD20_1_3

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1900..3075
DNA (1176bp) protein (392aa)
Glycosyl transferase, group 1 n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LDI6_9FIRM (db=UNIREF evalue=1.0e-79 bit_score=300.0 identity=41.62 coverage=92.3469387755102)
glycosyl transferase family protein (EC:2.4.-.-)
coiled-coil (db=Coil db_id=coil from=315 to=336 evalue=NA)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=369 evalue=3.4e-65)
ACD20_1_4

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comp(3257..4105)
DNA (849bp) protein (283aa)
signal peptide peptidase A
seg (db=Seg db_id=seg from=97 to=109)
SppA_dom: signal peptide peptidase SppA, 36K (db=HMMTigr db_id=TIGR00706 from=21 to=233 evalue=2.1e-96 interpro_id=IPR004635 interpro_description=Peptidase S49, SppA GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
Peptidase_S49 (db=HMMPfam db_id=PF01343 from=84 to=234 evalue=6.9e-52 interpro_id=IPR002142 interpro_description=Peptidase S49 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
ACD20_1_5

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comp(4129..4914)
DNA (786bp) protein (262aa)
MazG family protein
mazG: MazG family protein (db=HMMTigr db_id=TIGR00444 from=15 to=254 evalue=2.3e-114 interpro_id=IPR011551 interpro_description=NTP pyrophosphohydrolase MazG, bacterial)
MazG (db=HMMPfam db_id=PF03819 from=31 to=104 evalue=1.6e-28 interpro_id=IPR004518 interpro_description=NTP pyrophosphohydrolase MazG, putative catalytic core)
all-alpha NTP pyrophosphatases (db=superfamily db_id=SSF101386 from=5 to=111 evalue=1.4e-24)
ACD20_1_6

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comp(4904..5257)
DNA (354bp) protein (118aa)
4904..5257 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE02907.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_1_7

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comp(5375..6181)
DNA (807bp) protein (269aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=235 to=257)
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=230)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
ACD20_1_8

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comp(6239..7027)
DNA (789bp) protein (263aa)
seg (db=Seg db_id=seg from=22 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=222 to=244)
transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
ACD20_1_9

Not on your lists

comp(7126..7620)
DNA (495bp) protein (165aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase
lumazine-synth: 6,7-dimethyl-8-ribityl (db=HMMTigr db_id=TIGR00114 from=14 to=151 evalue=2.0e-77 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
Lumazine synthase (db=superfamily db_id=SSF52121 from=2 to=156 evalue=5.3e-60 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE (DMRL SYNTHASE) (LUMAZINE SYNTHASE) (db=HMMPanther db_id=PTHR21058 from=3 to=158 evalue=7.5e-60 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
ACD20_1_10

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comp(7632..8864)
DNA (1233bp) protein (411aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V7C5_SULSY (db=UNIREF evalue=5.0e-145 bit_score=517.0 identity=63.0 coverage=96.5936739659367)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25)
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25)
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (db=HMMPIR db_id=PIRSF001259 from=1 to=410 evalue=2.8e-195 interpro_id=IPR016299 interpro_description=Riboflavin biosynthesis protein RibA)
ACD20_1_11

Not on your lists

comp(8867..9511)
DNA (645bp) protein (215aa)
riboflavin synthase subunit alpha
Riboflavin synthase, alpha subunit (db=HMMPIR db_id=PIRSF000498 from=1 to=210 evalue=2.1e-88 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
RIBOFLAVIN SYNTHASE ALPHA CHAIN (db=HMMPanther db_id=PTHR21098 from=1 to=213 evalue=6.4e-76 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
ribE: riboflavin synthase, alpha subunit (db=HMMTigr db_id=TIGR00187 from=1 to=202 evalue=2.4e-69 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
ACD20_1_12

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comp(9764..10684)
DNA (921bp) protein (307aa)
Tpl protein n=2 Tax=Fusobacterium RepID=C6JQD1_FUSVA (db=UNIREF evalue=3.0e-54 bit_score=215.0 identity=44.22 coverage=80.4560260586319)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=76 to=97 evalue=NA)
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=78 to=222 evalue=1.4e-55)
ACD20_1_13

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11186..11578
DNA (393bp) protein (131aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=45 to=50)
seg (db=Seg db_id=seg from=7 to=32)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=3 to=23 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
ACD20_1_14

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comp(11705..13003)
DNA (1299bp) protein (433aa)
secA; SecA
SEC-C (db=HMMPfam db_id=PF02810 from=415 to=431 evalue=1.5e-09 interpro_id=IPR004027 interpro_description=SEC-C motif)
Sec-C motif (db=superfamily db_id=SSF103642 from=412 to=432 evalue=7.9e-06)
Uncharacterized protein {ECO:0000313|EMBL:EKE02915.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_1_15

Not on your lists

comp(13029..13814)
DNA (786bp) protein (262aa)
multi-copper polyphenol oxidoreductase laccase
CNF1/YfiH-like putative cysteine hydrolases (db=superfamily db_id=SSF64438 from=1 to=260 evalue=4.3e-62 interpro_id=IPR011324 interpro_description=Cytotoxic necrotizing factor-like, catalytic)
Cu-oxidase_4 (db=HMMPfam db_id=PF02578 from=27 to=257 evalue=2.2e-61 interpro_id=IPR003730 interpro_description=Multi-copper polyphenol oxidoreductase, laccase)
no description (db=Gene3D db_id=G3DSA:3.60.140.10 from=4 to=260 evalue=3.3e-58 interpro_id=IPR003730 interpro_description=Multi-copper polyphenol oxidoreductase, laccase)
ACD20_1_16

Not on your lists

14144..15217
DNA (1074bp) protein (358aa)
ribokinase (EC:2.7.1.15)
coiled-coil (db=Coil db_id=coil from=334 to=355 evalue=NA)
seg (db=Seg db_id=seg from=340 to=351)
Ribokinase-like (db=superfamily db_id=SSF53613 from=1 to=341 evalue=8.8e-65)
Displaying 16 items

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