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ACD20_5

Alias: ACD20_14520.19719.14

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_5_1

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comp(150..800)
DNA (651bp) protein (217aa)
Predicted orf n=10 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY71_9BACT (db=UNIREF evalue=1.0e-46 bit_score=189.0 identity=45.05 coverage=92.6267281105991)
transposase
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=53 to=215 evalue=1.5e-07 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
TRANSPOSABLE ELEMENT TC3 TRANSPOSASE (db=HMMPanther db_id=PTHR23022:SF9 from=108 to=170 evalue=1.6e-06)
ACD20_5_2

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comp(989..1201)
DNA (213bp) protein (71aa)
989..1201 - (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04514.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_5_3

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comp(1298..1561)
DNA (264bp) protein (88aa)
1298..1561 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04515.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_5_4

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1779..3245
DNA (1467bp) protein (489aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=293 to=315)
transmembrane_regions (db=TMHMM db_id=tmhmm from=320 to=337)
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=369)
ACD20_5_5

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comp(3505..3702)
DNA (198bp) protein (66aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKE04511.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_5_6

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4000..4560
DNA (561bp) protein (187aa)
seg (db=Seg db_id=seg from=84 to=94)
coiled-coil (db=Coil db_id=coil from=140 to=161 evalue=NA)
coiled-coil (db=Coil db_id=coil from=62 to=83 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE04512.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_5_7

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5879..6160
DNA (282bp) protein (94aa)
putative transcriptional repressor PagR
transcriptional regulator, ArsR family protein n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693C84 (db=UNIREF evalue=6.0e-15 bit_score=82.8 identity=43.68 coverage=91.4893617021277)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=93 evalue=1.2e-19)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=9 to=92 evalue=3.8e-16 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD20_5_8

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comp(6225..8378)
DNA (2154bp) protein (718aa)
Putative uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZA99_NODSP (db=UNIREF evalue=0.0 bit_score=792.0 identity=55.67 coverage=97.4930362116992)
Tex-like protein
Tex-like protein
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=1 to=714 evalue=4.1e-273)
ACD20_5_9

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8589..9359
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZY4_9BACT (db=UNIREF evalue=2.0e-35 bit_score=152.0 identity=36.95 coverage=93.7743190661479)
beta-lactamase domain-containing protein
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=10 to=256 evalue=1.1e-54)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=10 to=254 evalue=5.7e-49)
ACD20_5_10

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comp(9421..9633)
DNA (213bp) protein (71aa)
9421..9633 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE04505.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_5_11

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comp(10793..11281)
DNA (489bp) protein (163aa)
recombinase
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=7 to=15 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
no description (db=HMMSmart db_id=SM00857 from=4 to=151 evalue=5.6e-24 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=2 to=152 evalue=6.4e-22 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
ACD20_5_12

Not on your lists

11717..12712
DNA (996bp) protein (332aa)
cyclic beta 1-2 glucan synthetase
coiled-coil (db=Coil db_id=coil from=300 to=321 evalue=NA)
Galactose mutarotase-like (db=superfamily db_id=SSF74650 from=32 to=302 evalue=4.2e-52 interpro_id=IPR011013 interpro_description=Glycoside hydrolase-type carbohydrate-binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: carbohydrate binding (GO:0030246))
Glyco_transf_36 (db=HMMPfam db_id=PF06165 from=95 to=197 evalue=2.4e-25 interpro_id=IPR010383 interpro_description=Glycosyltransferase 36)
ACD20_5_13

Not on your lists

12714..15464
DNA (2751bp) protein (917aa)
Cyclic beta 1-2 glucan synthetase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SZE7_JANMA (db=UNIREF evalue=0.0 bit_score=778.0 identity=43.4 coverage=91.3849509269357)
putative cyclic beta 1-2 glucan synthetase
putative cyclic beta 1-2 glucan synthetase
Six-hairpin glycosidases (db=superfamily db_id=SSF48208 from=342 to=911 evalue=5.3e-81 interpro_id=IPR008928 interpro_description=Six-hairpin glycosidase-like GO=Molecular Function: catalytic activity (GO:0003824))
ACD20_5_14

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15505..16914
DNA (1410bp) protein (470aa)
hypothetical protein
DUF2329 (db=HMMPfam db_id=PF10091 from=247 to=450 evalue=1.6e-41 interpro_id=IPR019282 interpro_description=Protein of unknown function DUF2329)
hypothetical protein alias=ACD20_14520.19719.14G0014,ACD20_14520.19719.14_14,ACD20_C00005G00014 id=17800 tax=ACD20 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE04509.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_5_15

Not on your lists

16937..19540
DNA (2604bp) protein (868aa)
beta-galactosidase/beta-glucuronidase
beta-galactosidase/beta-glucuronidase
Glycoside hydrolase family 2, sugar binding n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C9D3_ACAM1 (db=UNIREF evalue=2.0e-83 bit_score=314.0 identity=30.96 coverage=79.7235023041475)
seg (db=Seg db_id=seg from=854 to=867)
GH family 5 Jill Banfield (11/15/12)
Displaying 15 items

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