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ACD20_177_6

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: 2399..3025

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 208.0
  • Bit_score: 235
  • Evalue 1.10e-59
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=96 to=120 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=208 evalue=3.6e-80 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.60e-80

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 627
ATGGGAAGGTATATAGGAGCAAGTTGTAGAAAGTGTCGTGCCTTAGGCGAGAAACTTTTTTTAAAAGCTAAAAAATGCGCAACGGCAAAATGCATGCTGGAGAGAAGAAATTTCAGACCTGGTCAGCATGGAAAGAACAGAAAGAAAGTTTCTGAATATGGCATACAGCTGACAGAAAAGCAGAAGCTGAAACACATGTATGGAATGGGCGAAAAGCAATTCAGTCTATATTTTCAGAATGCGGCACGAATGAAAGGTATTACAGGTAATAATCTTTTATTAATGCTGGAAAGAAGACTGGATAACGTATTAATGAGATCCGGTTTTGCCGGTTCACGCAAGCAGTCCAGACAGATAGTCAGACACGGACATGTACGCATTAATGATAAAAGAGTGGATATTCCGTCTTACATGATTAAAAAAGACGATAAGGTACAGATAGAAAATACAGAAAAAGCAAAGAAGATGATTACGGGGATAATGGAATTAACTTCAGGCAGACCGGTTCCAAAATGGTTAAAAGCGGATGCAGAGAAGAGTGTTGTTGAAGTTACCGGAATGCCCGGAATAGAAGATTTGGATCATAAAATAAACGTTCAGCTGATAGTTGAACTGTATTCTAAGTAA
PROTEIN sequence
Length: 209
MGRYIGASCRKCRALGEKLFLKAKKCATAKCMLERRNFRPGQHGKNRKKVSEYGIQLTEKQKLKHMYGMGEKQFSLYFQNAARMKGITGNNLLLMLERRLDNVLMRSGFAGSRKQSRQIVRHGHVRINDKRVDIPSYMIKKDDKVQIENTEKAKKMITGIMELTSGRPVPKWLKADAEKSVVEVTGMPGIEDLDHKINVQLIVELYSK*