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ACD21_11

Alias: ACD21_29560.47132.12

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_11_1

Not on your lists

2..415
DNA (414bp) protein (138aa)
2..415 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE01334.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_11_2

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502..1752
DNA (1251bp) protein (417aa)
lolC; Lipoprotein-releasing system transmembrane protein lolC
lolC; Lipoprotein-releasing system transmembrane protein lolC
Lipoprotein releasing system transmembrane protein n=6 Tax=Coxiella burnetii RepID=B6J731_COXB1 (db=UNIREF evalue=4.0e-116 bit_score=421.0 identity=53.12 coverage=99.0407673860911)
transmembrane_regions (db=TMHMM db_id=tmhmm from=377 to=399)
ACD21_11_3

Not on your lists

1974..2669
DNA (696bp) protein (232aa)
lipoprotein ABC transporter ATP-binding protein LolD
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=150 to=164 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
LolD_lipo_ex: lipoprotein releasing syst (db=HMMTigr db_id=TIGR02211 from=9 to=229 evalue=2.5e-140 interpro_id=IPR011924 interpro_description=Lipoprotein releasing system, ATP-binding protein GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=10 to=228 evalue=9.3e-98)
ACD21_11_4

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2701..4113
DNA (1413bp) protein (471aa)
glycosyl transferase
Glycosyl transferase family 39 n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELE5_ACIF5 (db=UNIREF evalue=4.0e-49 bit_score=199.0 identity=35.58 coverage=96.6029723991507)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=179)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=200)
ACD21_11_5

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4181..5629
DNA (1449bp) protein (483aa)
Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0ABM1_ALHEH (db=UNIREF evalue=1.0e-170 bit_score=603.0 identity=62.82 coverage=97.9296066252588)
microcin-processing peptidase 2
microcin-processing peptidase 2
seg (db=Seg db_id=seg from=114 to=128)
ACD21_11_6

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5904..6179
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6D4_KANKD (db=UNIREF evalue=6.0e-29 bit_score=129.0 identity=72.22 coverage=96.7391304347826)
histone family protein DNA-binding protein
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=3.9e-38 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD21_11_7

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6507..8381
DNA (1875bp) protein (625aa)
ppiD; Peptidylprolyl isomerase (EC:5.2.1.8)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=14 to=22)
Triger factor/SurA peptide-binding domain-like (db=superfamily db_id=SSF109998 from=39 to=241 evalue=2.8e-16 interpro_id=IPR008880 interpro_description=Trigger factor, C-terminal, bacterial GO=Biological Process: protein folding (GO:0006457), Biological Process: protein transport (GO:0015031))
ACD21_11_8

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8393..8926
DNA (534bp) protein (178aa)
hypothetical protein
ATP:cob(I)alamin adenosyltransferase, putative n=1 Tax=Ruegeria pomeroyi RepID=Q5LVH9_SILPO (db=UNIREF evalue=1.0e-24 bit_score=115.0 identity=39.77 coverage=89.3258426966292)
seg (db=Seg db_id=seg from=161 to=170)
Cobalamin adenosyltransferase-like (db=superfamily db_id=SSF89028 from=2 to=177 evalue=7.2e-45 interpro_id=IPR016030 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like)
ACD21_11_9

Not on your lists

comp(8975..9772)
DNA (798bp) protein (266aa)
Enoyl-(Acyl-carrier-protein) reductase n=1 Tax=Methylococcus capsulatus RepID=Q609H1_METCA (db=UNIREF evalue=2.0e-96 bit_score=355.0 identity=63.42 coverage=96.2406015037594)
fabI; enoyl-ACP reductase (EC:1.3.1.9)
fabI; enoyl-ACP reductase (EC:1.3.1.9)
ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (db=HMMPanther db_id=PTHR19410:SF12 from=4 to=250 evalue=9.9e-84 interpro_id=IPR014358 interpro_description=Enoyl-[acyl-carrier-protein] reductase (NADH) GO=Molecular Function: enoyl-[acyl-carrier-protein] reductase (NADH) activity (GO:0004318), Biological Process: fatty acid biosynthetic process (GO:0006633), Biological Process: oxidation reduction (GO:0055114))
ACD21_11_10

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10039..10248
DNA (210bp) protein (70aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE01343.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_11_11

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10495..11121
DNA (627bp) protein (209aa)
seg (db=Seg db_id=seg from=5 to=17)
seg (db=Seg db_id=seg from=144 to=157)
seg (db=Seg db_id=seg from=60 to=79)
seg (db=Seg db_id=seg from=104 to=117)
ACD21_11_12

Not on your lists

11236..11772
DNA (537bp) protein (179aa)
hypothetical membrane associated protein
Putative membrane associated protein {ECO:0000313|EMBL:EKE01345.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=7 Tax=Coxiella burnetii RepID=A9N8P5_COXBR
ACD21_11_13

Not on your lists

comp(11783..13648)
DNA (1866bp) protein (622aa)
pbpA; cell elongation specific D,D-transpeptidase
pbpA; cell elongation specific D,D-transpeptidase
Cell elongation specific D,D-transpeptidase n=6 Tax=Coxiella burnetii RepID=B6J871_COXB1 (db=UNIREF evalue=3.0e-177 bit_score=625.0 identity=50.41 coverage=97.9099678456592)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
ACD21_11_14

Not on your lists

comp(13650..14087)
DNA (438bp) protein (146aa)
rRNA large subunit methyltransferase
Ribosomal RNA large subunit methyltransferase H n=3 Tax=Coxiella burnetii RepID=RLMH_COXB1 (db=UNIREF evalue=2.0e-37 bit_score=157.0 identity=54.86 coverage=97.9452054794521)
seg (db=Seg db_id=seg from=67 to=81)
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=143 evalue=2.3e-60)
ACD21_11_15

Not on your lists

comp(14116..14508)
DNA (393bp) protein (131aa)
Iojap-related protein
iojap_ybeB: iojap-like ribosome-associated (db=HMMTigr db_id=TIGR00090 from=9 to=107 evalue=3.3e-44 interpro_id=IPR004394 interpro_description=Iojap-related protein)
DUF143 (db=HMMPfam db_id=PF02410 from=11 to=107 evalue=4.8e-30 interpro_id=IPR004394 interpro_description=Iojap-related protein)
IOJAP SUPERFAMILY ORTHOLOG (db=HMMPanther db_id=PTHR21043 from=11 to=111 evalue=1.2e-26 interpro_id=IPR004394 interpro_description=Iojap-related protein)
ACD21_11_16

Not on your lists

comp(14525..15163)
DNA (639bp) protein (213aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=5 to=211 evalue=5.2e-55 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
TIGR00482: nicotinate (nicotinamide) nuc (db=HMMTigr db_id=TIGR00482 from=8 to=211 evalue=1.3e-54 interpro_id=IPR005248 interpro_description=Probable nicotinate-nucleotide adenylyltransferase GO=Biological Process: NAD biosynthetic process (GO:0009435), Molecular Function: nucleotidyltransferase activity (GO:0016779))
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=1 to=211 evalue=3.0e-48)
ACD21_11_17

Not on your lists

comp(15174..16256)
DNA (1083bp) protein (361aa)
holA; DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PIB2_CELJU (db=UNIREF evalue=1.0e-71 bit_score=274.0 identity=44.88 coverage=91.4127423822715)
seg (db=Seg db_id=seg from=179 to=192)
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=28 to=344 evalue=3.1e-82 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
ACD21_11_18

Not on your lists

comp(16217..16738)
DNA (522bp) protein (174aa)
rare lipoprotein B precursor; K03643 LPS-assembly lipoprotein (db=KEGG evalue=2.0e-10 bit_score=68.2 identity=30.14 coverage=82.183908045977)
Rare lipoprotein B n=6 Tax=Coxiella burnetii RepID=B6J864_COXB1 (db=UNIREF evalue=3.0e-10 bit_score=67.8 identity=30.14 coverage=82.183908045977)
seg (db=Seg db_id=seg from=78 to=92)
RplB (db=HMMPfam db_id=PF04390 from=21 to=161 evalue=9.1e-25 interpro_id=IPR007485 interpro_description=Lipopolysccharide-assembly, LptE GO=Biological Process: cellular membrane organization (GO:0016044), Biological Process: Gram-negative-bacterium-type cell outer membrane assembly (GO:0043165))
ACD21_11_19

Not on your lists


comp(16774..17739)
DNA (966bp) protein (322aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA synthetase n=6 Tax=Coxiella burnetii RepID=SYL_COXB1 (db=UNIREF evalue=3.0e-102 bit_score=375.0 identity=57.84 coverage=93.4782608695652)
seg (db=Seg db_id=seg from=306 to=321)
ACD21_11_20

Not on your lists

comp(20459..21901)
DNA (1443bp) protein (481aa)
sufB; cysteine desulfurase activator complex subunit SufB
sufB; cysteine desulfurase activator complex subunit SufB
FeS assembly protein SufB n=3 Tax=Nitrosococcus RepID=Q3J8A3_NITOC (db=UNIREF evalue=0.0 bit_score=734.0 identity=74.64 coverage=99.3762993762994)
seg (db=Seg db_id=seg from=353 to=363)
ACD21_11_21

Not on your lists

comp(21988..22599)
DNA (612bp) protein (204aa)
S24 family peptidase (db=KEGG evalue=8.0e-08 bit_score=60.1 identity=35.9 coverage=37.7450980392157)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=64 to=130 evalue=6.6e-08 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=64 to=173 evalue=6.5e-05)
HTH_CROC1 (db=ProfileScan db_id=PS50943 from=68 to=123 evalue=9.641 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD21_11_22

Not on your lists

22732..24072
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PK14_9COXI (db=UNIREF evalue=8.0e-35 bit_score=152.0 identity=27.75 coverage=79.4183445190157)
hypothetical protein
seg (db=Seg db_id=seg from=394 to=408)
Uncharacterized protein {ECO:0000313|EMBL:EKE01327.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_11_23

Not on your lists

24100..24510
DNA (411bp) protein (137aa)
seg (db=Seg db_id=seg from=101 to=111)
Uncharacterized protein {ECO:0000313|EMBL:EKE01328.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_11_24

Not on your lists

24486..24608
DNA (123bp) protein (41aa)
24486..24608 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01329.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_11_25

Not on your lists

24637..26673
DNA (2037bp) protein (679aa)
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Sulfatase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMD4_9FIRM (db=UNIREF evalue=2.0e-93 bit_score=347.0 identity=33.33 coverage=88.9543446244477)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=213)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
ACD21_11_26

Not on your lists

26636..27019
DNA (384bp) protein (128aa)
diacylglycerol kinase (EC:2.7.1.107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=59)
seg (db=Seg db_id=seg from=105 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
ACD21_11_27

Not on your lists

27198..28253
DNA (1056bp) protein (352aa)
GMP reductase n=1 Tax=Rickettsiella grylli RepID=A8PN64_9COXI (db=UNIREF evalue=5.0e-142 bit_score=507.0 identity=69.68 coverage=97.1590909090909)
guaC; GMP reductase
guaC; GMP reductase
IMP_DH_GMP_RED (db=PatternScan db_id=PS00487 from=174 to=186 evalue=0.0 interpro_id=IPR015875 interpro_description=IMP dehydrogenase / GMP reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD21_11_28

Not on your lists

28296..29087
DNA (792bp) protein (264aa)
Phospholipase/carboxylesterase superfamily n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VN15_9CYAN (db=UNIREF evalue=3.0e-72 bit_score=275.0 identity=50.0 coverage=95.0757575757576)
Phospholipase/Carboxylesterase/Putative lysophospholipase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR12277:SF8 from=36 to=255 evalue=1.1e-61)
ACD21_11_29
RBG_16_Gammaproteobacteria_37_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29084..30121
DNA (1038bp) protein (346aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5R662_9FIRM (db=UNIREF evalue=2.0e-113 bit_score=412.0 identity=55.72 coverage=95.0867052023121)
seg (db=Seg db_id=seg from=14 to=31)
ACD21_11_30

Not on your lists

30277..31674
DNA (1398bp) protein (466aa)
exonuclease
exonuclease
Exonuclease n=6 Tax=Coxiella burnetii RepID=A9N8N5_COXBR (db=UNIREF evalue=6.0e-128 bit_score=461.0 identity=51.18 coverage=96.9957081545064)
seg (db=Seg db_id=seg from=180 to=189)
Displaying items 1-30 of 46 in total

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