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ACD21_17

Alias: ACD21_21909.61253.11

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_17_1

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154..1308
DNA (1155bp) protein (385aa)
dnaJ; chaperone protein DnaJ
dnaJ; chaperone protein DnaJ
Chaperone protein dnaJ n=2 Tax=Methylophilaceae RepID=DNAJ_METFK (db=UNIREF evalue=5.0e-109 bit_score=398.0 identity=53.42 coverage=96.3636363636364)
seg (db=Seg db_id=seg from=317 to=328)
ACD21_17_2
RBG_16_Gammaproteobacteria_37_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1351..1845
DNA (495bp) protein (165aa)
dfrD; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=2 Tax=uncultured SUP05 cluster bacterium RepID=D0U4K0_9GAMM (db=UNIREF evalue=2.0e-31 bit_score=137.0 identity=46.46 coverage=76.3636363636364)
seg (db=Seg db_id=seg from=143 to=155)
seg (db=Seg db_id=seg from=4 to=15)
ACD21_17_3

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comp(1881..3587)
DNA (1707bp) protein (569aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Rickettsia bellii OSU 85-389 RepID=A8GXG5_RICB8 (db=UNIREF evalue=2.0e-93 bit_score=347.0 identity=53.09 coverage=59.9297012302285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD21_17_4

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comp(3584..3862)
DNA (279bp) protein (93aa)
hypothetical protein
RelE-like (db=superfamily db_id=SSF143011 from=3 to=87 evalue=7.5e-16)
Plasmid_stabil (db=HMMPfam db_id=PF05016 from=45 to=88 evalue=4.1e-09 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
RelE_StbE: addiction module toxin, RelE/Stb (db=HMMTigr db_id=TIGR02385 from=6 to=88 evalue=0.00081 interpro_id=IPR012753 interpro_description=Addiction module toxin, RelE/StbE)
ACD21_17_5

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comp(3853..4074)
DNA (222bp) protein (74aa)
hypothetical protein
RHH_1 (db=HMMPfam db_id=PF01402 from=7 to=44 evalue=0.00015 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKE01554.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) RepID=Q4UK11_RICFE
ACD21_17_6

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comp(4147..5625)
DNA (1479bp) protein (493aa)
radical SAM additional 4Fe4S-binding SPASM domain
Fe-S oxidoreductase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=UPI0001AF4EA1 (db=UNIREF evalue=1.0e-77 bit_score=294.0 identity=31.43 coverage=92.9006085192698)
MOAA_NIFB_PQQE (db=PatternScan db_id=PS01305 from=123 to=134 evalue=0.0 interpro_id=IPR000385 interpro_description=MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=115 to=431 evalue=1.6e-38)
ACD21_17_7

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comp(5703..5909)
DNA (207bp) protein (69aa)
5703..5909 - (rbs_motif=GGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01556.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_17_8

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6217..6801
DNA (585bp) protein (195aa)
GTP cyclohydrolase 1 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=D3SB85_THISK (db=UNIREF evalue=1.0e-67 bit_score=258.0 identity=65.75 coverage=92.3076923076923)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP_CYCLOHYDROL_1_2 (db=PatternScan db_id=PS00860 from=120 to=130 evalue=0.0 interpro_id=IPR018234 interpro_description=GTP cyclohydrolase I, conserved site GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
GTP_CYCLOHYDROL_1_1 (db=PatternScan db_id=PS00859 from=72 to=88 evalue=0.0 interpro_id=IPR018234 interpro_description=GTP cyclohydrolase I, conserved site GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
ACD21_17_9

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6804..7163
DNA (360bp) protein (120aa)
Dihydroneopterin aldolase n=2 Tax=Wolbachia RepID=C0R3V3_WOLWR (db=UNIREF evalue=5.0e-11 bit_score=70.1 identity=37.18 coverage=64.1666666666667)
FolB domain protein
Tetrahydrobiopterin biosynthesis enzymes-like (db=superfamily db_id=SSF55620 from=4 to=105 evalue=3.0e-16)
FolB (db=HMMPfam db_id=PF02152 from=7 to=106 evalue=4.8e-15 interpro_id=IPR006157 interpro_description=Dihydroneopterin aldolase GO=Molecular Function: dihydroneopterin aldolase activity (GO:0004150), Biological Process: folic acid and derivative metabolic process (GO:0006760))
ACD21_17_10

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7187..8110
DNA (924bp) protein (308aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=264 to=285 evalue=NA)
Zeta_toxin (db=HMMPfam db_id=PF06414 from=70 to=216 evalue=2.8e-06 interpro_id=IPR010488 interpro_description=Zeta toxin GO=Biological Process: cell killing (GO:0001906), Molecular Function: ATP binding (GO:0005524))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=72 to=235 evalue=0.00045)
ACD21_17_11

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8119..9459
DNA (1341bp) protein (447aa)
Folate synthesis bifunctional protein n=1 Tax=Rickettsiella grylli RepID=A8PL37_9COXI (db=UNIREF evalue=1.0e-116 bit_score=423.0 identity=47.2 coverage=98.2102908277405)
folKP; folate synthesis bifunctional protein (EC:2.5.1.15 2.7.6.3)
DHPS_2 (db=PatternScan db_id=PS00793 from=217 to=230 evalue=0.0 interpro_id=IPR000489 interpro_description=Pterin-binding GO=Biological Process: pteridine and derivative metabolic process (GO:0042558))
DHPS_1 (db=PatternScan db_id=PS00792 from=183 to=198 evalue=0.0 interpro_id=IPR000489 interpro_description=Pterin-binding GO=Biological Process: pteridine and derivative metabolic process (GO:0042558))
ACD21_17_12

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9456..10559
DNA (1104bp) protein (368aa)
Queuine tRNA-ribosyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BIF0_9GAMM (db=UNIREF evalue=9.0e-161 bit_score=570.0 identity=71.47 coverage=97.554347826087)
queuine tRNA-ribosyltransferase
queuine tRNA-ribosyltransferase
Q_tRNA_tgt: queuine tRNA-ribosyltransfera (db=HMMTigr db_id=TIGR00430 from=3 to=364 evalue=2.9e-224 interpro_id=IPR004803 interpro_description=Queuine tRNA-ribosyltransferase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
ACD21_17_13

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10561..10902
DNA (342bp) protein (114aa)
Sec protein secretion system subunit YajC
Preprotein translocase, YajC subunit n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB46_KANKD (db=UNIREF evalue=3.0e-25 bit_score=117.0 identity=57.14 coverage=78.9473684210526)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=3 to=17)
ACD21_17_14

Not on your lists

10927..12789
DNA (1863bp) protein (621aa)
secD; protein-export membrane protein SecD
secD; protein-export membrane protein SecD
Protein-export membrane protein SecD n=6 Tax=Coxiella burnetii RepID=A9NDM5_COXBR (db=UNIREF evalue=7.0e-173 bit_score=611.0 identity=55.65 coverage=98.389694041868)
transmembrane_regions (db=TMHMM db_id=tmhmm from=477 to=499)
ACD21_17_15

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12800..13717
DNA (918bp) protein (306aa)
secF; preprotein translocase subunit SecF
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF n=2 Tax=Legionella longbeachae RepID=D1RGP9_LEGLO (db=UNIREF evalue=2.0e-89 bit_score=332.0 identity=56.72 coverage=99.3464052287582)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
ACD21_17_16

Not on your lists

13737..14981
DNA (1245bp) protein (415aa)
phosphate-selective porin O and P
Phosphate-selective porin O and P superfamily n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6B8_9GAMM (db=UNIREF evalue=1.0e-39 bit_score=167.0 identity=30.31 coverage=87.710843373494)
seg (db=Seg db_id=seg from=104 to=117)
Porin_O_P (db=HMMPfam db_id=PF07396 from=58 to=414 evalue=1.1e-67 interpro_id=IPR010870 interpro_description=Phosphate-selective porin O/P)
ACD21_17_17

Not on your lists

15155..16654
DNA (1500bp) protein (500aa)
nucleotide transport protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=472 to=491)
transmembrane_regions (db=TMHMM db_id=tmhmm from=445 to=467)
transmembrane_regions (db=TMHMM db_id=tmhmm from=387 to=409)
ACD21_17_18

Not on your lists

comp(16697..17119)
DNA (423bp) protein (141aa)
stress protein
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=1 to=131 evalue=4.2e-22 interpro_id=IPR009002 interpro_description=FMN-binding split barrel, related)
Pyridox_oxidase (db=HMMPfam db_id=PF01243 from=7 to=91 evalue=6.1e-13 interpro_id=IPR011576 interpro_description=Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO=Molecular Function: FMN binding (GO:0010181))
Uncharacterized protein {ECO:0000313|EMBL:EKE01542.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_17_19

Not on your lists

comp(17130..17468)
DNA (339bp) protein (113aa)
transcriptional modulator of MazE/toxin, MazF
seg (db=Seg db_id=seg from=25 to=41)
no description (db=Gene3D db_id=G3DSA:2.30.30.110 from=1 to=110 evalue=3.9e-30 interpro_id=IPR011067 interpro_description=Plasmid maintenance toxin/Cell growth inhibitor)
Cell growth inhibitor/plasmid maintenance toxic component (db=superfamily db_id=SSF50118 from=1 to=111 evalue=8.7e-30 interpro_id=IPR011067 interpro_description=Plasmid maintenance toxin/Cell growth inhibitor)
ACD21_17_20

Not on your lists

comp(17455..17682)
DNA (228bp) protein (76aa)
seg (db=Seg db_id=seg from=35 to=46)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=1 to=45 evalue=4.2e-06 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription (GO:0045449))
Uncharacterized protein {ECO:0000313|EMBL:EKE01544.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD21_17_21

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comp(17796..18665)
DNA (870bp) protein (290aa)
hypothetical protein (db=KEGG evalue=1.0e-10 bit_score=70.5 identity=26.83 coverage=92.7586206896552)
Putative uncharacterized protein n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BLG8_PHOAA (db=UNIREF evalue=1.0e-10 bit_score=70.5 identity=26.83 coverage=92.7586206896552)
Acid proteases (db=superfamily db_id=SSF50630 from=30 to=155 evalue=1.1e-07 interpro_id=IPR021109 interpro_description=Peptidase aspartic)
Acid proteases (db=superfamily db_id=SSF50630 from=178 to=280 evalue=8.5e-05 interpro_id=IPR021109 interpro_description=Peptidase aspartic)
ACD21_17_22

Not on your lists

comp(18679..18891)
DNA (213bp) protein (71aa)
Transcriptional regulator, XRE family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31DK2_THICR (db=UNIREF evalue=4.0e-25 bit_score=116.0 identity=80.88 coverage=94.3661971830986)
XRE family transcriptional regulator
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=65 evalue=8.6e-11 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=6 to=62 evalue=0.0052 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD21_17_23

Not on your lists

comp(18901..19440)
DNA (540bp) protein (180aa)
conserved membrane protein of unknown function
Putative uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HNL0_LEGLN (db=UNIREF evalue=5.0e-14 bit_score=80.5 identity=41.28 coverage=60.0)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
ACD21_17_24

Not on your lists

comp(19637..20608)
DNA (972bp) protein (324aa)
Tetratricopeptide repeat protein
coiled-coil (db=Coil db_id=coil from=67 to=135 evalue=NA)
coiled-coil (db=Coil db_id=coil from=248 to=269 evalue=NA)
seg (db=Seg db_id=seg from=77 to=90)
ACD21_17_25

Not on your lists

comp(20700..21206)
DNA (507bp) protein (169aa)
Peptidoglycan-associated lipoprotein n=6 Tax=Coxiella burnetii RepID=A9KGT8_COXBN (db=UNIREF evalue=2.0e-36 bit_score=154.0 identity=47.09 coverage=93.491124260355)
peptidoglycan-associated lipoprotein
Pal_lipo: peptidoglycan-associated lipoprote (db=HMMTigr db_id=TIGR02802 from=62 to=165 evalue=4.2e-59 interpro_id=IPR014169 interpro_description=Peptidoglycan-associated lipoprotein)
no description (db=Gene3D db_id=G3DSA:3.30.1330.60 from=47 to=164 evalue=7.3e-28 interpro_id=IPR006665 interpro_description=Outer membrane protein, OmpA/MotB, C-terminal GO=Cellular Component: cell outer membrane (GO:0009279))
ACD21_17_26

Not on your lists

comp(21482..22762)
DNA (1281bp) protein (427aa)
Protein tolB n=7 Tax=Coxiella burnetii RepID=TOLB_COXBU (db=UNIREF evalue=8.0e-130 bit_score=467.0 identity=54.5 coverage=94.1451990632319)
tolB; TolB
tolB; TolB
propeller_TolB: Tol-Pal system beta pr (db=HMMTigr db_id=TIGR02800 from=13 to=422 evalue=1.6e-189 interpro_id=IPR014167 interpro_description=Tol-Pal system beta propeller repeat-containing protein, TolB GO=Biological Process: protein import (GO:0017038), Cellular Component: periplasmic space (GO:0042597))
ACD21_17_27

Not on your lists

comp(22796..23578)
DNA (783bp) protein (261aa)
tolA; TolA
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=35 to=45)
seg (db=Seg db_id=seg from=79 to=88)
ACD21_17_28

Not on your lists

24491..25603
DNA (1113bp) protein (371aa)
Membrane protein of an ABC transporter complex n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SD60_LEPBA (db=UNIREF evalue=2.0e-80 bit_score=303.0 identity=41.83 coverage=93.800539083558)
ABC transporter permease
ABC transporter permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=267 to=289)
ACD21_17_29

Not on your lists

25607..26347
DNA (741bp) protein (247aa)
ABC transporter related n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C1P4_DESAD (db=UNIREF evalue=5.0e-74 bit_score=280.0 identity=57.09 coverage=98.3805668016194)
ABC transporter related
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=142 to=156 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF52 from=6 to=241 evalue=1.2e-93)
ACD21_17_30

Not on your lists

26352..27146
DNA (795bp) protein (265aa)
Periplasmic component of an ABC transporter complex n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SD62_LEPBA (db=UNIREF evalue=1.0e-37 bit_score=160.0 identity=31.53 coverage=96.2264150943396)
ABC transporter substrate-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
MCE (db=HMMPfam db_id=PF02470 from=40 to=143 evalue=5.0e-09 interpro_id=IPR003399 interpro_description=Mammalian cell entry related)
Displaying items 1-30 of 63 in total

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