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ACD21_19

Alias: ACD21_16195.31565.11

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_19_1

Not on your lists

91..675
DNA (585bp) protein (195aa)
Superoxide dismutase (Fe) (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Beggiatoa sp. PS RepID=A7C4I5_9GAMM (db=UNIREF evalue=2.0e-72 bit_score=275.0 identity=65.97 coverage=97.4358974358974)
SOD_MN (db=PatternScan db_id=PS00088 from=157 to=164 evalue=0.0 interpro_id=IPR019833 interpro_description=Manganese/iron superoxide dismutase, binding site GO=Molecular Function: superoxide dismutase activity (GO:0004784), Biological Process: superoxide metabolic process (GO:0006801), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
Superoxide dismutase, Mn/Fe specific (db=HMMPIR db_id=PIRSF000349 from=1 to=194 evalue=4.0e-109 interpro_id=IPR001189 interpro_description=Manganese/iron superoxide dismutase GO=Molecular Function: superoxide dismutase activity (GO:0004784), Biological Process: superoxide metabolic process (GO:0006801), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
ACD21_19_2

Not on your lists

comp(710..1513)
DNA (804bp) protein (268aa)
icc protein
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=1 to=263 evalue=8.0e-43)
Metallophos_C (db=HMMPfam db_id=PF08413 from=205 to=240 evalue=5.5e-16 interpro_id=IPR013622 interpro_description=Calcineurin-like phosphoesterase C-terminal)
Metallophos (db=HMMPfam db_id=PF00149 from=6 to=197 evalue=3.8e-11 interpro_id=IPR004843 interpro_description=Metallophosphoesterase GO=Molecular Function: hydrolase activity (GO:0016787))
ACD21_19_3

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comp(1589..2890)
DNA (1302bp) protein (434aa)
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein n=6 Tax=Coxiella burnetii RepID=A9KBW4_COXBN (db=UNIREF evalue=1.0e-158 bit_score=563.0 identity=67.21 coverage=97.6958525345622)
seg (db=Seg db_id=seg from=19 to=37)
ACD21_19_4

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comp(2914..4653)
DNA (1740bp) protein (580aa)
ABC transporter permease protein
ABC transporter permease protein
ABC transporter permease protein n=6 Tax=Coxiella burnetii RepID=A9KBW3_COXBN (db=UNIREF evalue=2.0e-165 bit_score=585.0 identity=56.97 coverage=99.6551724137931)
seg (db=Seg db_id=seg from=491 to=508)
ACD21_19_5

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4941..5615
DNA (675bp) protein (225aa)
hypothetical protein
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=7 to=46 evalue=6.3e-06 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Uncharacterized protein {ECO:0000313|EMBL:EKE01787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Helix-turn-helix domain protein n=1 Tax=Rickettsiella grylli RepID=A8PLE9_9COXI
ACD21_19_6

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5728..5988
DNA (261bp) protein (87aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE01788.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HRU2_LEGPN
ACD21_19_7

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5943..6260
DNA (318bp) protein (106aa)
hypothetical protein
DUF2442 (db=HMMPfam db_id=PF10387 from=21 to=97 evalue=8.8e-20 interpro_id=IPR018841 interpro_description=Protein of unknown function DUF2442)
NE0471 N-terminal domain-like (db=superfamily db_id=SSF143880 from=18 to=102 evalue=2.3e-18)
Uncharacterized protein {ECO:0000313|EMBL:EKE01789.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_19_8

Not on your lists

6245..8509
DNA (2265bp) protein (755aa)
DNA helicase II n=1 Tax=Rickettsiella grylli RepID=A8PP66_9COXI (db=UNIREF evalue=0.0 bit_score=795.0 identity=56.34 coverage=94.9668874172185)
ATP-dependent DNA helicase UvrD (EC:3.6.1.-)
ATP-dependent DNA helicase UvrD (EC:3.6.1.-)
seg (db=Seg db_id=seg from=469 to=479)
ACD21_19_9

Not on your lists

8648..9799
DNA (1152bp) protein (384aa)
tapV; type IV pilus assembly protein TapV
seg (db=Seg db_id=seg from=370 to=379)
seg (db=Seg db_id=seg from=282 to=303)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD21_19_10

Not on your lists

9885..10643
DNA (759bp) protein (253aa)
tRNA pseudouridine synthase A n=1 Tax=Colwellia psychrerythraea 34H RepID=TRUA_COLP3 (db=UNIREF evalue=1.0e-79 bit_score=299.0 identity=56.0 coverage=98.0237154150198)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
hisT_truA: tRNA pseudouridine synthase A (db=HMMTigr db_id=TIGR00071 from=2 to=239 evalue=8.0e-112 interpro_id=IPR001406 interpro_description=Pseudouridine synthase I, TruA GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=1 to=246 evalue=1.8e-86 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD21_19_11

Not on your lists

comp(10633..12042)
DNA (1410bp) protein (470aa)
ankyrin repeat protein
ankyrin repeat protein
Ankyrin repeat domain protein n=1 Tax=Rickettsiella grylli RepID=A8PNL9_9COXI (db=UNIREF evalue=4.0e-100 bit_score=369.0 identity=42.64 coverage=97.4468085106383)
seg (db=Seg db_id=seg from=388 to=397)
ACD21_19_12

Not on your lists

comp(12058..12414)
DNA (357bp) protein (119aa)
coiled-coil (db=Coil db_id=coil from=70 to=98 evalue=NA)
seg (db=Seg db_id=seg from=91 to=106)
Uncharacterized protein {ECO:0000313|EMBL:EKE01794.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_19_13

Not on your lists

12547..13419
DNA (873bp) protein (291aa)
AcetylCoA carboxylase, carboxytransferase component subunit beta
AcetylCoA carboxylase, carboxytransferase component subunit beta
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Marinobacter aquaeolei VT8 RepID=ACCD_MARAV (db=UNIREF evalue=3.0e-103 bit_score=378.0 identity=63.19 coverage=98.6254295532646)
seg (db=Seg db_id=seg from=181 to=192)
ACD21_19_14

Not on your lists

13422..14684
DNA (1263bp) protein (421aa)
Folylpolyglutamate synthase n=6 Tax=Coxiella burnetii RepID=B6J6W5_COXB1 (db=UNIREF evalue=5.0e-98 bit_score=361.0 identity=44.8 coverage=95.4869358669834)
folC; dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
folC; dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
folC: bifunctional protein FolC (db=HMMTigr db_id=TIGR01499 from=22 to=412 evalue=2.3e-109 interpro_id=IPR001645 interpro_description=Folylpolyglutamate synthetase GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid and derivative biosynthetic process (GO:0009396))
ACD21_19_15

Not on your lists

14688..15479
DNA (792bp) protein (264aa)
seg (db=Seg db_id=seg from=64 to=76)
seg (db=Seg db_id=seg from=9 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
Sporulation related repeat (db=superfamily db_id=SSF110997 from=182 to=259 evalue=2.3e-11 interpro_id=IPR007730 interpro_description=Sporulation related domain)
ACD21_19_16

Not on your lists

15476..15997
DNA (522bp) protein (174aa)
colicin V production protein
CvpA family protein n=1 Tax=Rickettsiella grylli RepID=A8PMV6_9COXI (db=UNIREF evalue=1.0e-29 bit_score=132.0 identity=43.31 coverage=89.6551724137931)
seg (db=Seg db_id=seg from=120 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
ACD21_19_17

Not on your lists

comp(16051..16275)
DNA (225bp) protein (75aa)
coiled-coil (db=Coil db_id=coil from=18 to=39 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE01799.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_19_18

Not on your lists

comp(16285..17034)
DNA (750bp) protein (250aa)
coiled-coil (db=Coil db_id=coil from=69 to=90 evalue=NA)
coiled-coil (db=Coil db_id=coil from=114 to=149 evalue=NA)
seg (db=Seg db_id=seg from=117 to=128)
Uncharacterized protein {ECO:0000313|EMBL:EKE01800.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_19_19

Not on your lists

comp(17082..17963)
DNA (882bp) protein (294aa)
5'-nucleotidase n=6 Tax=Coxiella burnetii RepID=A9KFT2_COXBN (db=UNIREF evalue=3.0e-112 bit_score=408.0 identity=66.89 coverage=98.9795918367347)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase (EC:3.1.3.5)
5-nucleotidase (db=HMMPfam db_id=PF06189 from=34 to=292 evalue=2.2e-115 interpro_id=IPR010394 interpro_description=5-nucleotidase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: magnesium ion binding (GO:0000287), Cellular Component: cytoplasm (GO:0005737), Molecular Function: 5'-nucleotidase activity (GO:0008253), Biological Process: nucleotide metabolic process (GO:0009117))
ACD21_19_20

Not on your lists

comp(17956..21282)
DNA (3327bp) protein (1109aa)
ATP-dependent nuclease subunit A
ATP-dependent nuclease subunit A
ATP-dependent nuclease subunit A n=6 Tax=Coxiella burnetii RepID=A9KFS9_COXBN (db=UNIREF evalue=0.0 bit_score=811.0 identity=43.06 coverage=98.2867448151488)
coiled-coil (db=Coil db_id=coil from=208 to=232 evalue=NA)
ACD21_19_21

Not on your lists

21685..22155
DNA (471bp) protein (157aa)
acetyltransferase
Acetyltransferase, GNAT family n=6 Tax=Clostridium RepID=A5I0C3_CLOBH (db=UNIREF evalue=1.0e-15 bit_score=85.9 identity=39.71 coverage=82.8025477707006)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=145 evalue=5.6e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=50 to=121 evalue=5.7e-09 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD21_19_22

Not on your lists

comp(22101..24440)
DNA (2340bp) protein (780aa)
addB; ATP-dependent nuclease subunit B
addB; ATP-dependent nuclease subunit B
Putative uncharacterized protein n=1 Tax=Nitrosomonas europaea RepID=Q82SW8_NITEU (db=UNIREF evalue=3.0e-103 bit_score=380.0 identity=32.32 coverage=93.4615384615385)
seg (db=Seg db_id=seg from=396 to=407)
ACD21_19_23

Not on your lists

comp(24924..25592)
DNA (669bp) protein (223aa)
qseB; QseB
Transcriptional regulatory protein n=6 Tax=Coxiella burnetii RepID=A9KFS6_COXBN (db=UNIREF evalue=6.0e-73 bit_score=276.0 identity=62.98 coverage=91.9282511210762)
seg (db=Seg db_id=seg from=4 to=15)
no description (db=HMMSmart db_id=SM00448 from=1 to=112 evalue=3.4e-38 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD21_19_24

Not on your lists

25801..26007
DNA (207bp) protein (69aa)
25801..26007 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01779.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_19_25

Not on your lists

26067..26255
DNA (189bp) protein (63aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE01780.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_19_26

Not on your lists

26452..26652
DNA (201bp) protein (67aa)
GNAT family acetyltransferase
Acetyltransferase n=2 Tax=Clostridium butyricum RepID=B1R2M4_CLOBU (db=UNIREF evalue=3.0e-18 bit_score=94.0 identity=66.13 coverage=91.044776119403)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=66 evalue=4.1e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=7 to=63 evalue=9.8e-11 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD21_19_27

Not on your lists

comp(26718..27920)
DNA (1203bp) protein (401aa)
RmuC family protein
RmuC family protein
RmuC family protein n=6 Tax=Coxiella burnetii RepID=B6J7N4_COXB1 (db=UNIREF evalue=1.0e-125 bit_score=453.0 identity=67.78 coverage=81.7955112219451)
coiled-coil (db=Coil db_id=coil from=150 to=171 evalue=NA)
ACD21_19_28

Not on your lists

comp(27958..28170)
DNA (213bp) protein (71aa)
PAS/PAC sensor protein
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=2 to=49 evalue=6.9e-09)
Uncharacterized protein {ECO:0000313|EMBL:EKE01773.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Metal dependent phosphohydrolase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JTI7_9THEM
ACD21_19_29

Not on your lists

comp(28311..28808)
DNA (498bp) protein (166aa)
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=9 to=119 evalue=2.2e-21)
sensory_box: PAS domain S-box (db=HMMTigr db_id=TIGR00229 from=2 to=126 evalue=9.4e-19 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165))
no description (db=Gene3D db_id=G3DSA:3.30.450.20 from=8 to=126 evalue=1.6e-18)
ACD21_19_30

Not on your lists

29064..29261
DNA (198bp) protein (66aa)
29064..29261 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01775.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 32 in total

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