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ACD21_28

Alias: ACD21_45737.19372.11

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_28_1

Not on your lists

comp(2..1120)
DNA (1119bp) protein (373aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG n=8 Tax=Enterobacteriaceae RepID=MNMG_PECCP (db=UNIREF evalue=3.0e-161 bit_score=571.0 identity=70.62 coverage=99.1957104557641)
gidA; glucose-inhibited division protein A
gidA; glucose-inhibited division protein A
GIDA_1 (db=PatternScan db_id=PS01280 from=271 to=285 evalue=0.0 interpro_id=IPR020595 interpro_description=Glucose-inhibited division protein A-related, conserved site)
ACD21_28_2

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comp(1295..1903)
DNA (609bp) protein (203aa)
coiled-coil (db=Coil db_id=coil from=168 to=189 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE01092.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_28_3
unknown

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comp(2188..3648)
DNA (1461bp) protein (487aa)
seg (db=Seg db_id=seg from=463 to=478)
seg (db=Seg db_id=seg from=213 to=241)
seg (db=Seg db_id=seg from=189 to=207)
seg (db=Seg db_id=seg from=51 to=68)
ACD21_28_4

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3825..4460
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=2 Tax=Thiomonas RepID=D5X4T9_THIIN (db=UNIREF evalue=9.0e-40 bit_score=166.0 identity=41.04 coverage=98.1132075471698)
HAD-superfamily hydrolase
HAD-like (db=superfamily db_id=SSF56784 from=1 to=211 evalue=5.3e-52)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=4 to=210 evalue=7.7e-37)
ACD21_28_5

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4719..5678
DNA (960bp) protein (320aa)
Bis(5'-nucleosyl)-tetraphosphatase (Symmetrical) n=1 Tax=Rickettsiella grylli RepID=A8PQA6_9COXI (db=UNIREF evalue=3.0e-85 bit_score=318.0 identity=57.2 coverage=81.875)
diadenosine tetraphosphatase
apaH: bis(5'-nucleosyl)-tetraphosphatase (sy (db=HMMTigr db_id=TIGR00668 from=49 to=319 evalue=3.4e-108 interpro_id=IPR004617 interpro_description=Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO=Molecular Function: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity (GO:0008803))
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=49 to=305 evalue=5.2e-63)
ACD21_28_6

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comp(5647..5961)
DNA (315bp) protein (105aa)
hypothetical protein
seg (db=Seg db_id=seg from=58 to=69)
seg (db=Seg db_id=seg from=3 to=17)
GlnB-like (db=superfamily db_id=SSF54913 from=7 to=104 evalue=9.1e-19 interpro_id=IPR011322 interpro_description=Nitrogen regulatory PII-like, alpha/beta)
ACD21_28_7

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comp(5958..6335)
DNA (378bp) protein (126aa)
camphor resistance protein CrcB
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
ACD21_28_8

Not on your lists

6782..7234
DNA (453bp) protein (151aa)
IcmW n=6 Tax=Coxiella burnetii RepID=A9KDJ6_COXBN (db=UNIREF evalue=2.0e-42 bit_score=174.0 identity=54.05 coverage=97.3509933774834)
icmW; IcmW
IcmW {ECO:0000313|EMBL:EKE01084.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_28_9

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7227..7652
DNA (426bp) protein (142aa)
7227..7652 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01085.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_28_10

Not on your lists

7673..9028
DNA (1356bp) protein (452aa)
seg (db=Seg db_id=seg from=292 to=309)
seg (db=Seg db_id=seg from=334 to=346)
Uncharacterized protein {ECO:0000313|EMBL:EKE01086.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_28_11

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comp(9090..10028)
DNA (939bp) protein (313aa)
rfaD; ADP-glyceromanno-heptose 6-epimerase
rfaD; ADP-glyceromanno-heptose 6-epimerase
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=HLDD_PELCD (db=UNIREF evalue=7.0e-112 bit_score=407.0 identity=63.14 coverage=99.3610223642172)
seg (db=Seg db_id=seg from=124 to=135)
ACD21_28_12

Not on your lists

comp(10038..11465)
DNA (1428bp) protein (476aa)
rfaE bifunctional protein
rfaE bifunctional protein
RfaE bifunctional protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=D3SD73_THISK (db=UNIREF evalue=6.0e-151 bit_score=537.0 identity=56.66 coverage=99.1596638655462)
seg (db=Seg db_id=seg from=283 to=295)
ACD21_28_13

Not on your lists

comp(11455..11949)
DNA (495bp) protein (165aa)
methylated-DNA--protein-cysteine methyltransferase
seg (db=Seg db_id=seg from=145 to=156)
MGMT (db=PatternScan db_id=PS00374 from=125 to=131 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
ogt: methylated-DNA-[protein]-cysteine S-met (db=HMMTigr db_id=TIGR00589 from=77 to=158 evalue=1.0e-35 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD21_28_14

Not on your lists


comp(11921..12304)
DNA (384bp) protein (128aa)
50S ribosomal protein L19 n=8 Tax=Legionella RepID=RL19_LEGPA (db=UNIREF evalue=7.0e-42 bit_score=172.0 identity=68.7 coverage=89.0625)
rplS; 50S ribosomal protein L19
coiled-coil (db=Coil db_id=coil from=101 to=122 evalue=NA)
Ribosomal_L19 (db=HMMPfam db_id=PF01245 from=3 to=114 evalue=3.3e-44 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD21_28_15
RBG_16_Gammaproteobacteria_37_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12387..13067)
DNA (681bp) protein (227aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase
seg (db=Seg db_id=seg from=201 to=212)
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=200 evalue=1.9e-97 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=224 evalue=2.1e-90 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
ACD21_28_16

Not on your lists

comp(13088..13585)
DNA (498bp) protein (166aa)
rimM; 16S rRNA-processing protein RimM
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=4 to=165 evalue=5.2e-58 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022))
PRC-barrel domain (db=superfamily db_id=SSF50346 from=97 to=165 evalue=2.2e-20 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
Translation proteins (db=superfamily db_id=SSF50447 from=3 to=91 evalue=1.2e-17 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel)
ACD21_28_17

Not on your lists


comp(13606..13971)
DNA (366bp) protein (122aa)
rpsP; 30S ribosomal protein S16
seg (db=Seg db_id=seg from=92 to=121)
coiled-coil (db=Coil db_id=coil from=94 to=122 evalue=NA)
30S RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919 from=1 to=77 evalue=3.1e-30 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD21_28_18

Not on your lists

comp(14341..16011)
DNA (1671bp) protein (557aa)
recN; DNA repair protein RecN
recN; DNA repair protein RecN
DNA repair protein RecN n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VPQ7_PSEU5 (db=UNIREF evalue=7.0e-125 bit_score=451.0 identity=43.24 coverage=99.4614003590664)
seg (db=Seg db_id=seg from=462 to=475)
ACD21_28_19

Not on your lists

comp(16080..16955)
DNA (876bp) protein (292aa)
inorganic polyphosphate/ATP-NAD kinase
NAD kinase (db=superfamily db_id=SSF111331 from=6 to=289 evalue=8.4e-80 interpro_id=IPR016064 interpro_description=ATP-NAD kinase, PpnK-type GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
POLY(P)/ATP NAD KINASE (db=HMMPanther db_id=PTHR20275 from=6 to=290 evalue=4.9e-57 interpro_id=IPR002504 interpro_description=ATP-NAD/AcoX kinase GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
NAD_kinase (db=HMMPfam db_id=PF01513 from=17 to=271 evalue=3.5e-55 interpro_id=IPR002504 interpro_description=ATP-NAD/AcoX kinase GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
ACD21_28_20

Not on your lists

17061..17414
DNA (354bp) protein (118aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE01075.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_28_21

Not on your lists

comp(17437..17658)
DNA (222bp) protein (74aa)
17437..17658 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01076.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_28_22

Not on your lists

comp(17849..19351)
DNA (1503bp) protein (501aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase n=7 Tax=Coxiella burnetii RepID=LNT_COXBU (db=UNIREF evalue=8.0e-94 bit_score=348.0 identity=45.22 coverage=93.2135728542914)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
Displaying 22 items

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