ggKbase home page

ACD21_39

Alias: ACD21_98876.15729.11

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_39_1

Not on your lists

comp(195..653)
DNA (459bp) protein (153aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
DUF304 (db=HMMPfam db_id=PF03703 from=67 to=139 evalue=4.6e-11 interpro_id=IPR005182 interpro_description=Protein of unknown function DUF304, transmembrane flanked domain, bacterial)
ACD21_39_2

Not on your lists

comp(744..2099)
DNA (1356bp) protein (452aa)
Glucosamine-1-phosphate N-acetyltransferase n=6 Tax=Coxiella burnetii RepID=GLMU_COXB1 (db=UNIREF evalue=9.0e-153 bit_score=543.0 identity=57.11 coverage=99.1150442477876)
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
glmU: UDP-N-acetylglucosamine diphosphorylas (db=HMMTigr db_id=TIGR01173 from=3 to=451 evalue=9.1e-268 interpro_id=IPR005882 interpro_description=Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO=Molecular Function: magnesium ion binding (GO:0000287), Biological Process: cell morphogenesis (GO:0000902), Molecular Function: UDP-N-acetylglucosamine diphosphorylase activity (GO:0003977), Cellular Component: cytoplasm (GO:0005737), Biological Process: lipopoly
ACD21_39_3

Not on your lists

comp(2109..2540)
DNA (432bp) protein (144aa)
atpC; F0F1 ATP synthase subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=6 Tax=Coxiella burnetii RepID=ATPE_COXB1 (db=UNIREF evalue=5.0e-31 bit_score=136.0 identity=62.24 coverage=97.2222222222222)
seg (db=Seg db_id=seg from=19 to=34)
seg (db=Seg db_id=seg from=118 to=129)
ACD21_39_4

Not on your lists

comp(2591..3970)
DNA (1380bp) protein (460aa)
F0F1 ATP synthase subunit beta
F0F1 ATP synthase subunit beta
ATP synthase subunit beta n=2 Tax=Thioalkalivibrio RepID=ATPB_THISH (db=UNIREF evalue=0.0 bit_score=674.0 identity=78.87 coverage=99.5652173913043)
seg (db=Seg db_id=seg from=138 to=153)
ACD21_39_5

Not on your lists

comp(4026..4931)
DNA (906bp) protein (302aa)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=21 Tax=Pseudomonas RepID=ATPG_PSEA7 (db=UNIREF evalue=6.0e-86 bit_score=320.0 identity=53.38 coverage=87.7483443708609)
seg (db=Seg db_id=seg from=160 to=173)
ACD21_39_6

Not on your lists

comp(4946..6490)
DNA (1545bp) protein (515aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=6 Tax=Coxiella burnetii RepID=ATPA_COXB1 (db=UNIREF evalue=0.0 bit_score=686.0 identity=71.43 coverage=94.9514563106796)
seg (db=Seg db_id=seg from=224 to=232)
ACD21_39_7

Not on your lists

comp(6500..7027)
DNA (528bp) protein (176aa)
atpH; F0F1 ATP synthase subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=6 Tax=Pseudomonas aeruginosa RepID=ATPD_PSEA7 (db=UNIREF evalue=5.0e-24 bit_score=113.0 identity=36.99 coverage=96.0227272727273)
OSCP (db=HMMPfam db_id=PF00213 from=9 to=174 evalue=8.0e-41 interpro_id=IPR000711 interpro_description=ATPase, F1 complex, OSCP/delta subunit GO=Cellular Component: plasma membrane (GO:0005886), Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933))
ATP_synt_delta: ATP synthase F1, delta (db=HMMTigr db_id=TIGR01145 from=7 to=174 evalue=6.9e-33 interpro_id=IPR000711 interpro_description=ATPase, F1 complex, OSCP/delta subunit GO=Cellular Component: plasma membrane (GO:0005886), Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933))
ACD21_39_8

Not on your lists

comp(7030..7500)
DNA (471bp) protein (157aa)
atpF; F0 sector of membrane-bound ATP synthase, subunit B
ATP synthase subunit b 1 n=1 Tax=Methylococcus capsulatus PF1_METCA">RepID=ATPF1_METCA (db=UNIREF evalue=1.0e-36 bit_score=154.0 identity=50.0 coverage=96.1783439490446)
coiled-coil (db=Coil db_id=coil from=51 to=90 evalue=NA)
coiled-coil (db=Coil db_id=coil from=106 to=127 evalue=NA)
ACD21_39_9

Not on your lists

comp(7560..7859)
DNA (300bp) protein (100aa)
atpE; ATP synthase C chain (EC:3.6.3.14)
ATP synthase F0, C subunit n=1 Tax=Rickettsiella grylli RepID=A8PQE9_9COXI (db=UNIREF evalue=6.0e-19 bit_score=96.3 identity=60.2 coverage=97.0)
seg (db=Seg db_id=seg from=14 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ACD21_39_10

Not on your lists

comp(7905..8693)
DNA (789bp) protein (263aa)
ATP synthase subunit a n=1 Tax=Rickettsiella grylli RepID=A8PQE8_9COXI (db=UNIREF evalue=5.0e-89 bit_score=330.0 identity=59.3 coverage=95.8174904942966)
atpB; F0F1 ATP synthase subunit A (EC:3.6.3.14)
atpB; F0F1 ATP synthase subunit A (EC:3.6.3.14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
ACD21_39_11

Not on your lists

comp(8698..9084)
DNA (387bp) protein (129aa)
atpI; ATP synthase protein I
ATP synthase protein I n=6 Tax=Coxiella burnetii RepID=A9KBG4_COXBN (db=UNIREF evalue=6.0e-12 bit_score=73.2 identity=45.12 coverage=58.9147286821705)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
ACD21_39_12

Not on your lists

comp(9105..10196)
DNA (1092bp) protein (364aa)
acriflavin resistance periplasmic protein
seg (db=Seg db_id=seg from=114 to=127)
coiled-coil (db=Coil db_id=coil from=149 to=177 evalue=NA)
RND_mfp: efflux transporter, RND family, MFP (db=HMMTigr db_id=TIGR01730 from=53 to=359 evalue=7.2e-77 interpro_id=IPR006143 interpro_description=Secretion protein HlyD GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Cellular Component: membrane (GO:0016020))
ACD21_39_13

Not on your lists

comp(10233..11477)
DNA (1245bp) protein (415aa)
lipid A core-O-antigen ligase-like enzyme
O-Antigen Polymerase family n=1 Tax=Rickettsiella grylli RepID=A8PNA9_9COXI (db=UNIREF evalue=4.0e-32 bit_score=142.0 identity=36.22 coverage=88.1927710843374)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=182)
ACD21_39_14

Not on your lists

comp(11449..12261)
DNA (813bp) protein (271aa)
family 2 glycosyl transferase
seg (db=Seg db_id=seg from=13 to=29)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=268 evalue=5.1e-38)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=217 evalue=9.6e-25)
ACD21_39_15

Not on your lists

comp(12262..14985)
DNA (2724bp) protein (908aa)
Protein translocase subunit secA n=7 Tax=Coxiella burnetii RepID=SECA_COXBU (db=UNIREF evalue=0.0 bit_score=1212.0 identity=63.54 coverage=99.6696035242291)
secA; preprotein translocase subunit SecA
secA; preprotein translocase subunit SecA
seg (db=Seg db_id=seg from=833 to=844)
ACD21_39_16

Not on your lists

15052..15465
DNA (414bp) protein (138aa)
seg (db=Seg db_id=seg from=56 to=68)
DUF721 (db=HMMPfam db_id=PF05258 from=7 to=94 evalue=1.2e-13 interpro_id=IPR007922 interpro_description=Protein of unknown function DUF721)
Uncharacterized protein {ECO:0000313|EMBL:EKE00563.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_39_17

Not on your lists

15574..15765
DNA (192bp) protein (64aa)
yefM; antitoxin YefM
PhdYeFM (db=HMMPfam db_id=PF02604 from=1 to=63 evalue=3.1e-21 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
YefM-like (db=superfamily db_id=SSF143120 from=1 to=64 evalue=9.4e-17)
phd_fam: prevent-host-death family protein (db=HMMTigr db_id=TIGR01552 from=3 to=56 evalue=7.1e-09 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
Displaying 17 items

View Taxonomy