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ACD21_48

Alias: ACD21_25592.16051.14

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD21_48_1

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3..551
DNA (549bp) protein (183aa)
coiled-coil (db=Coil db_id=coil from=30 to=72 evalue=NA)
coiled-coil (db=Coil db_id=coil from=79 to=111 evalue=NA)
seg (db=Seg db_id=seg from=23 to=46)
seg (db=Seg db_id=seg from=161 to=173)
ACD21_48_2

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comp(671..1015)
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=101 to=112)
Uncharacterized protein {ECO:0000313|EMBL:EKE01460.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_48_3

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1024..1149
DNA (126bp) protein (42aa)
1024..1149 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE01461.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_48_4

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comp(1310..1435)
DNA (126bp) protein (42aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKE01451.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_48_5

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1498..1794
DNA (297bp) protein (99aa)
coiled-coil (db=Coil db_id=coil from=61 to=89 evalue=NA)
seg (db=Seg db_id=seg from=6 to=21)
seg (db=Seg db_id=seg from=26 to=40)
Uncharacterized protein {ECO:0000313|EMBL:EKE01452.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD21_48_6

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1814..2155
DNA (342bp) protein (114aa)
superfamily I DNA and RNA helicase with ankyrin domain
Ankyrin {ECO:0000313|EMBL:EKE01453.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Superfamily I DNA and RNA helicase with ankyrin domain n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IXC9_PSYTT
ACD21_48_7

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2142..3386
DNA (1245bp) protein (415aa)
ankyrin
Ankyrin n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1W061_9FLAO (db=UNIREF evalue=4.0e-79 bit_score=299.0 identity=38.35 coverage=97.5903614457831)
coiled-coil (db=Coil db_id=coil from=48 to=76 evalue=NA)
Ankyrin repeat (db=superfamily db_id=SSF48403 from=93 to=223 evalue=3.6e-11 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
ACD21_48_8

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3556..8106
DNA (4551bp) protein (1517aa)
Pfs n=1 Tax=Arthroderma otae CBS 113480 RepID=C5FZL2_NANOT (db=UNIREF evalue=5.0e-88 bit_score=330.0 identity=34.79 coverage=44.1001977587343)
ankX_8; Ankyrin repeats containing protein
ankX_8; Ankyrin repeats containing protein
coiled-coil (db=Coil db_id=coil from=147 to=168 evalue=NA)
ACD21_48_9

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comp(8184..9341)
DNA (1158bp) protein (386aa)
putative oxidoreductase YqhD
ADH_IRON_1 (db=PatternScan db_id=PS00913 from=171 to=199 evalue=0.0 interpro_id=IPR018211 interpro_description=Alcohol dehydrogenase, iron-type, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
ADH_IRON_2 (db=PatternScan db_id=PS00060 from=262 to=282 evalue=0.0 interpro_id=IPR018211 interpro_description=Alcohol dehydrogenase, iron-type, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
Dehydroquinate synthase-like (db=superfamily db_id=SSF56796 from=1 to=385 evalue=2.1e-110)
ACD21_48_10

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9706..14550
DNA (4845bp) protein (1615aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0N1_9GAMM (db=UNIREF evalue=0.0 bit_score=810.0 identity=32.78 coverage=94.984520123839)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=1325 to=1335)
ACD21_48_11

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14557..15720
DNA (1164bp) protein (388aa)
hypothetical protein
TWO COMPONENT HISTIDINE KINASE (SPORULATION KINASE) (db=HMMPanther db_id=PTHR23283:SF24 from=1 to=375 evalue=9.2e-36)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=1 to=375 evalue=9.2e-36)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=227 to=375 evalue=1.7e-27 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
Displaying 11 items

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